Ruditapes philippinarum (Manila clam): 132749273
Help
Entry
132749273 CDS
T09557
Name
(RefSeq) NPC intracellular cholesterol transporter 1-like isoform X1
KO
K24682
patched domain-containing protein
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rphi04990
]
132749273
Domain-containing proteins not elsewhere classified [BR:
rphi04990
]
Other domain-containing proteins
Patched domain-containing proteins
132749273
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sterol-sensing
Patched
MMPL
Motif
Other DBs
NCBI-GeneID:
132749273
NCBI-ProteinID:
XP_060594978
LinkDB
All DBs
Position
Unknown
AA seq
945 aa
AA seq
DB search
MDNKGFESDYSNGNTNSLQRVIEPYPQAERPTPGIVTKLRNAMIKGLESIFYKIGLTIAR
NPLKTIVISIIVPILLSIGMIKFKFNEDFAELLLPPSSRIFADRAWVQDHVPYEQRPIRL
ILKNSNVLTKKSMLALYDFHVQITELTVEGDQNFESMCVRIGGRCFVDSLLALWGNDRGK
IEKLTDEDIVYSINTVKTNPTYFFAFNATRMLGLIEYNSTDHIVAAGIMHADWFIQSSLE
LRPTAKKLEYKAIDLALSGHPYFDMINVFTMDSYSEEFFNGVYGDIILIVYGFPVVLLYI
ILALGKPNLLEHGVNLTIAAVLGVILSTGACFGLGMAAGFLFGAPHQALIFLLLAVGVDD
AFVIITTWNRINKHNKQFPIEERIAITMQHAGVSVTVTSFSDLVAFACGISTQMPVLKSF
CIYCSIGILFLFIMQSTLFPACLTLNQRRVESRRDACFPCIVYADYTPSAWSQSEIVRAG
IKKIFAPVLLSVVGRVLVILFTIGLAAVMAWSVSNIRKGFEIERSLPTDSYTRKFLESQR
LYFSSEGPGIQTFCGPMDYQKNINALNNMVQQYENSSFIMYGLVANWIPLYKFYVGFFHS
DLTRNEDGVPANKTAFYVTLKDFFTTAFGIPFSKYIEMTDDEVPQVKWTYFPMQQIVSQD
VWENEYIMEEVRRIADNANLTDGKCFSYSVFHIFTEVIRYVETEIIRNFVLAGIAIFIVT
LLLIVDVVTSFFVLVCVCLTTIDIMGCLHFWDFYLDVNLVVLLIISIGLAVDFSAHVGYT
FMTVTGTRKERATSTLCQIGPAIIHGAVTTFLVFFVLIFGQSLSSFFAVFILVVIFGLFH
GLCFLPVVLSIIGPSPYYNAGPEGTGSSRLTSNIEQNIYVIDKTNNIPEEKKPATVDTEE
ELQTNISKESLSNGTSSSVKYGSMNGKLEEKDEMDGGGVSNDTHF
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggacaacaagggatttgaaagcgattattcgaatggaaacactaatagcttacaacgt
gtaattgaaccatatccgcaagctgagcgaccaacaccaggcattgtgacaaaactaaga
aatgctatgataaaaggactcgagtcaatcttctataaaattggtctaacgattgccagg
aaccctctgaagacaatcgtcatcagcatcattgtcccaattttactgtcaattggaatg
atcaagtttaaattcaacgaagatttcgcagaactacttcttccgccatcttctcgaata
ttcgctgaccgcgcatgggttcaagatcacgtgccatatgagcaacgaccaatcagattg
attttgaagaattcaaatgtcctgacgaagaaaagcatgctggcgctttacgattttcat
gtgcaaataacggagctgaccgtggagggggatcaaaactttgaatctatgtgtgtcagg
attggtggaagatgttttgttgacagtctcttggcactgtggggaaatgatagagggaag
atagaaaaattgacggatgaagacattgtttattccattaacacggtaaaaacaaatcca
acatatttctttgcatttaacgcgactagaatgttaggactgattgagtataactctacg
gatcatatcgtcgcagcgggaatcatgcacgctgattggttcattcaatccagtctcgag
ttaagacctacagcaaaaaagctcgagtacaaagcaattgatttagctctctctggtcat
ccgtatttcgacatgataaatgtttttacaatggactcatattcagaagagttctttaac
ggagtgtacggtgatatcatactaattgtttatggatttccggtggtattactctatatc
attttggcgcttggaaaaccgaatttactcgagcatggggttaaccttaccatagctgcg
gtacttggtgtgatcctgtcaactggggcgtgcttcggtcttggtatggcagctgggttc
ctgtttggtgctccccatcaagcacttatatttctacttttagctgtcggagtggatgac
gcatttgtaataataactacatggaaccgtattaacaaacacaacaagcaatttcccata
gaagaaagaattgcaatcacaatgcagcacgcgggcgtctctgttactgtgacgtcattt
tctgatctagttgctttcgcttgtggtatatctacgcaaatgccagtgctcaagtcattc
tgtatatattgctccattggtattctatttttattcatcatgcaatcgacgcttttcccg
gcgtgtctcacactaaatcagcggcgagttgagtcccggcgtgatgcatgctttccgtgc
attgtatatgcagactacacgcccagcgcatggagccagtcagaaatagttagggcagga
attaagaagatatttgctccagttttattgtccgttgttggaagggtgcttgtaattcta
tttacaattggacttgcggcagttatggcatggagcgtgtcaaatataaggaaaggattt
gaaatagaacgtagtcttcccacagattcgtacactcggaaatttcttgagtcacagcgt
ttgtacttttcctcagaaggtccaggaatacaaacattttgtggaccaatggattatcag
aaaaatattaacgccctcaataatatggttcaacagtacgagaacagttcatttatcatg
tatgggttggttgccaactggattccactgtataaattttatgttggattcttccattcg
gatcttacacgtaatgaagacggagttcctgcaaacaaaacagcattttacgtaacactc
aaagattttttcactactgcatttggtatacctttctccaaatatatcgaaatgacagac
gatgaagtaccacaagtaaagtggacgtattttcccatgcagcaaatagtgtcacaggat
gtatgggaaaatgaatatataatggaagaagtccgacggattgctgacaatgcgaatcta
acagatggaaaatgtttctcatattctgtgttccatatttttactgaagttatcagatat
gtggagacagaaatcatcaggaactttgtactagctggcattgctatatttatagtaaca
ttattattaattgtggatgtcgtcacgagcttcttcgtcttagtgtgcgtctgtctgact
acgattgatattatgggatgtctacatttctgggatttttatttggatgtaaatttggtc
gtactactgatcatatctattggtttagcggtggatttctccgcccacgtaggctatacc
tttatgacagtaacaggcactagaaaagagcgtgccacgagtacattatgtcagataggt
cccgctattatacatggtgcagttacgacatttctggtatttttcgttctcatttttggt
caaagtctttcctctttctttgcggttttcattttagttgtgatatttggcttattccat
ggtttatgttttctgccagtggtattgagtataatcggtccatcaccgtactataatgcc
ggtccggaaggtacgggcagtagcaggttaacttcaaatatagaacagaatatctacgtg
atagataaaacaaacaatataccagaagagaaaaagcctgcgaccgtggacacagaggaa
gaactacagacgaatatttcaaaggaatctttatctaacggaactagcagttcagtgaaa
tatggatcaatgaacggaaagttagaagaaaaagacgaaatggacggagggggtgtttca
aacgatactcacttttga
DBGET
integrated database retrieval system
