Ruditapes philippinarum (Manila clam): 132749396
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Entry
132749396 CDS
T09557
Name
(RefSeq) cytoplasmic polyadenylation element-binding protein 1-like
KO
K02602
cytoplasmic polyadenylation element-binding protein
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rphi03019
]
132749396
Messenger RNA biogenesis [BR:
rphi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
132749396
Factors involved in mRNA localization
Trans-acting binding proteins
132749396
mRNA cycle factors
P-body specific factors
132749396
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CEBP_ZZ
RRM_7
CEBP1_N
RRM_1
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
132749396
NCBI-ProteinID:
XP_060595111
LinkDB
All DBs
Position
Unknown
AA seq
609 aa
AA seq
DB search
MSAATIAASRSAVLVPMHLSVMSPNSFRDNFGFQLFYPNTNQQYHNQNYSSQYKTDPYQA
YVQQKSDMFPISQQYSKPDNQNLQFSQQYSKPDNTNMQLNQPYSKPLCDSIQYSQPYSKP
ISDKSNNQFKLDNMCGPITKTTETPQKPSRAIRGSPNNSGYSDYDSSTGTPMTPSTPLNE
TLSPIEQIFGLMSSGNKQMSSRSNSPYDSDTSGFSSEGSEAALIDMMNTLKLNSREAKSP
ITDLSKQLYTAQQQQQQHQQAAIQQHHQQQQQQQLAQQQQLMQYQQQQVQQQQANSLSNG
LALPATEQVLGNRISGQILRPYMISNLDPYAIDRAARLHRSAAAMCEASCTWSGKIPPKN
YKNPTTFSCKVFLGGVPWDITEAGLQAAFDKFGSFKIEWPGRDGYVYLLFESEKAVRSLL
QECTHDYSTGEYYYNISSRRMRSKEVQVIPWMLSDSNFVRQPSQRLDANKTVFVGALHGM
ISAETLSVIMNDLFGNVVYSGIDCDKHKYPIGSGRVTFSSRRSYMKAVQAAFVEIKTPKF
TKKIQIDPYLEDSICSLCTLQPGPYFCRDLQCFKYFCRTCWYWKHEPDALRNHKPLSRNT
KGHASLALL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccgcaacaatcgctgcatctaggtcagcggtgctggtgcctatgcacctgtca
gttatgtccccaaactcattccgtgataattttggttttcagttgttttatcccaacacc
aatcagcaatatcataatcagaattattcctcacagtacaagacagatccttatcaagca
tatgtacaacagaagtcagacatgttccctatatctcaacaatacagtaaaccagataac
cagaatcttcaattctcccaacagtatagtaaaccagataacacaaacatgcaactcaat
cagccatacagtaaaccactttgtgacagtatccagtactcccagccatacagtaagccg
atatcggacaagtccaataaccagttcaaactggataatatgtgtggcccaatcaccaag
actactgaaacaccgcagaaaccttcaagagctattcgtggatctccaaataattctgga
tacagtgattatgattcaagtacaggaactccaatgaccccgtcaaccccattgaatgag
actttgtcccctatagagcagatatttggtctgatgtcatcgggtaataaacagatgtcc
tctagaagtaattcaccgtacgactcagacactagtggattcagcagtgaaggatcggaa
gccgctcttattgatatgatgaacacattgaagctgaacagtcgtgaagccaaatccccg
atcactgatctctcaaagcaactgtacactgcacaacaacagcaacagcagcaccagcag
gccgcaatacagcaacaccatcagcagcaacaacaacaacagttggcacagcaacaacag
ctgatgcagtaccagcagcaacaagttcagcaacagcaggccaacagtctctctaatggc
cttgctttgccagcgacagagcaggtcttaggaaaccgaatatcaggtcagattctccgc
ccctatatgatctccaatctagatccctatgccattgatagagcagccagacttcaccgt
agtgcagcagcaatgtgtgaggccagctgcacttggagtggtaaaattccgccaaagaat
tacaagaacccaacaacgttctcgtgcaaagtctttctaggtggcgtaccttgggatatc
actgaagctggtcttcaggcagcgtttgacaagtttggaagttttaagatagaatggcca
ggccgagatggatatgtttacttattgtttgagtccgagaaggcagtgcggtcattactg
caagaatgtacccatgattacagtactggggaatactactacaacatctcgagtcgcagg
atgagatctaaagaggttcaagtaattccatggatgttgagtgactcaaactttgtccgc
cagccatcacagagattggatgccaacaagaccgtgtttgtaggggcacttcacggaatg
atctccgcggaaacgctctctgtaatcatgaatgatctgtttgggaatgtggtgtattct
gggatagattgtgacaagcacaagtaccctattggtagtggaagggtgacattcagcagt
agaagaagttacatgaaagctgtgcaagctgcctttgttgagattaaaactccaaagttt
acaaagaagatccagatagatccatatctagaagacagcatctgctctctttgtacccta
cagcctggtccatatttctgccgggatctccagtgcttcaaatatttctgccgaacttgt
tggtactggaaacacgagcccgacgctctacgtaatcataaaccactaagtcgtaacacc
aagggacatgctagtctggccttactataa
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