Ruditapes philippinarum (Manila clam): 132749432
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Entry
132749432 CDS
T09557
Name
(RefSeq) ATPase family gene 2 protein homolog A-like
KO
K14575
AAA family ATPase
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
132749432
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rphi03009
]
132749432
Ribosome biogenesis [BR:
rphi03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
132749432
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_5
RuvB_N
AAA_16
TIP49
Rad17
RNA_helicase
AAA_22
AAA_2
Mg_chelatase
NPHP3_N
AAA_28
AAA_14
AAA_33
ABC_tran
AAA_7
ATPase_2
DUF815
Viral_helicase1
NACHT
RsgA_GTPase
DUF5906
nSTAND1
AAA_3
Adeno_IVa2
AAA_29
DUF6497
Motif
Other DBs
NCBI-GeneID:
132749432
NCBI-ProteinID:
XP_060595143
LinkDB
All DBs
Position
Unknown
AA seq
727 aa
AA seq
DB search
MVIQYYGQKFNFEVTNISGQTLPSETFQLQGTRDDIDGGNLSESIANLSITNNDSFVSGS
DGTSMDSNFGKSDSHSGVDVTSTPCSNRKTLDQSKGSEGSSIIGSGLNTSIDKLTTPIKG
TDGSTDNLFSPRTPVSDRSFSAHENFCTPKVEKFIEKNISQNFYKVTSRTKFVIQSVDSN
IEDRDTSAGKDAVRYADIGGMEKQIDMLKEMVHTPVEQPELFRSFGLPPPSGVLLFGPSG
CGKSMLVKAVISEININVQTVAASEIWSKFYGETETKLRKIFEDARRLAPSIIVIDDIET
LCPRRDGSHSEVEKRVVTSLLTLMDGINNVESGKFVMVLGTTSKPDVIDPALRRPGRFDR
EIEIGVPSVFDRREILDCMLRRLNHDLTVQEIQEVADAAHGYVGADLAALCKEASLHCMK
RVGYHSDMVCLTLADFNYAMTMVQPSAMREVQLEVPKVLWSDIGGQDHIKLKLKQAVEWP
LKHPEAFTRMGISPPRGILMYGPPGCSKTMIAKALATESGLNFLAVKGPELFSKWVGESE
RAVREVFRKARAASPAIIFFDEIDALAIERGSSSGSSNVADRVLAQLLTEIDGVEALKDV
TIVAATNRPDMIDKALLRPGRFDRVLYVPLPDLSTRAEIFTINLRKMPVDSDCTSTWLAD
CTAGYSGAEISSVCHEAALFALQEDITCQLVKKSHFQLALNTVTPRINDSLIKFYDEYQQ
KSGLHTV
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggtgattcaatactatggacaaaagtttaactttgaagtgacaaacattagtggtcag
acattgccatcagaaacattccaacttcagggaactagagacgatattgatggtggaaac
ttgtcagaaagtatagccaatctcagtataactaataatgattcatttgtctctgggtca
gacggaacttcaatggactctaattttggaaaaagtgattctcacagtggcgtagatgtt
acatcaacaccttgttctaacagaaaaactttagatcagtcaaaaggcagtgaaggcagt
tcaattataggatctggactcaacacatcaatagataaattgacaactcctataaaagga
acagatggatcaactgacaatttattttcaccccgaacacccgtcagtgacaggtcattt
agtgcacatgaaaatttttgtacgcctaaggttgaaaaatttatagagaaaaatatttcg
cagaatttttataaagtaacatcaaggactaagtttgttatacaaagtgttgatagtaat
atagaggatagggatacaagtgcaggaaaggatgctgtcaggtatgctgatattggtggt
atggaaaaacagattgatatgctaaaagaaatggttcatacgccagtagagcagcctgaa
cttttcagatcttttggtcttccacctccaagcggtgtgctattgtttggaccaagtggc
tgtggaaagtcgatgcttgtgaaagcagtcatctcagaaatcaacatcaacgtacagaca
gtggcagcttcagagatatggagcaaattttatggcgagacagaaaccaaattaagaaaa
atctttgaagatgccagacgactagctccgagtatcattgttatagatgatatagagact
ttatgtccacgtagagatggcagccacagcgaggtcgagaaaagagtggttacctccctt
cttacactgatggacggtataaataatgttgagagtgggaagtttgtgatggttctggga
actacaagtaaaccagatgttattgacccagctttgagacgacctggacgatttgataga
gagatagagattggggtaccatctgtgtttgacagaagagagattttagactgtatgttg
aggagattgaaccatgacctgactgtacaagagatacaggaagttgctgatgcagctcac
ggctatgttggtgcggatttagctgctctttgcaaagaagcgagtctacattgtatgaag
cgagttggatatcatagtgacatggtctgtttaacattggctgattttaactatgcaatg
actatggtacaacccagtgcaatgagagaagtccagttggaggtccctaaggttttatgg
agtgatataggtggacaggatcatattaagctgaaattgaaacaagctgtagagtggcca
ttaaaacaccccgaggcctttacaaggatgggtatatccccacctagagggatcctgatg
tatggaccacctggatgttctaaaacgatgatagccaaggcattggcaacagaaagtggg
ctcaattttctagctgtaaagggtcctgaattgttcagtaaatgggtgggagagtcagag
agggctgtgagagaagtgtttagaaaggcgcgagcagcgtccccggccatcatattcttc
gatgagatagatgctctagctatagaaagagggagttcatcagggagcagtaatgtagca
gatcgagtattggcgcagctattgacagagatagatggtgtggaagcgttgaaggatgtc
acgatcgtagctgctacaaacagaccagatatgattgataaggctttattgaggccggga
cgttttgaccgggtgttgtatgtcccactgccagatctgtcgacgagggcagagattttc
accatcaacctgcgtaaaatgcctgttgattcagactgtacatcaacctggcttgctgac
tgtaccgctgggtattccggcgctgagatttcctcagtgtgccatgaggcagcattattt
gctctacaagaggatataacctgtcagttagtgaagaaatcacatttccagctagcactg
aatacagttacacctcgtataaatgactctctcattaaattctatgatgaatatcagcaa
aaatctggtcttcatactgtatga
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