Ruditapes philippinarum (Manila clam): 132749439
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Entry
132749439 CDS
T09557
Name
(RefSeq) coatomer subunit beta-like
KO
K17301
coatomer subunit beta
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132749439
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rphi04147
]
132749439
Membrane trafficking [BR:
rphi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
132749439
Exosome [BR:
rphi04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
132749439
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT
HEAT_2
Cnd1
Coatomer_g_Cpla
Motif
Other DBs
NCBI-GeneID:
132749439
NCBI-ProteinID:
XP_060595150
LinkDB
All DBs
Position
Unknown
AA seq
956 aa
AA seq
DB search
MATLAEQPCYTLINIPTDAEPPTEMQLRTDLEKGDVKTKTEALKKTIQMILNGEKMPSLL
MTIIRFVMPMQDHMIKKLLLIFWEVVPKYTPDGKMLHEFILVCDAYRKDLQHPNEFIQGS
TLRFLCKLKEPELLEPLMPAIRQCLKHRHSYVRRNSVLAIYTIYRNFDFLIPDAPELIAE
YLEGEQDMSCKRNAFMMLIHADQERALNYLSSCIDQVTSFGDILQLVIVELIYKVCHANP
SERARFIRCIYNLLNSSSPAVRYEAAGTLVTLSSAPTAIKAAASCYIELVVKESDNNVKL
IVLDRLVALKEVPAHEKVLQELVMDILRVLNSPDQEVRKKTLNLALDLVTSRSVEEMVLV
LKKEVVKTNNVEHEDTGKYRQLLVRTLHQLSIKFPDIATTIIPVLIEFLGDSNEAAAADV
LVFIREAIHRFESLRSLIISKLLDVFSTIKAMKIQRAALWILGEYCTTSEDIQGVMTLVR
QSLGEIPIVDDELKKAAGEVSEDDTMSGGNIQRLVTADGTYATQSAFSTVSTRKKEENPP
LRQFLLDGDFFVGAALATSLTKLALRYMTIHTDPKRQNAFLAESMFIMATVLHLGKSGIP
TKPITDDDVDRIATCLRVLSEQSALMTDIFNTASRNSLSLMLQAKMAEEKEALQAAEKKV
VKVQADDPIAFAQLINKNELGATENMFELTLSQALGMTNKKEKDPIGASKLNKVTQLTGF
SDPVYAEAYVNVNQFDIVLDVLVVNQTADTLQNLTLELATLGDLKLVEKPQPLTMAPHDF
CNIKANVKVASTENGIIFGNIVYDVTGAASDRNVVVLNDIHIDIMDYIVPASCNDSEFRQ
MWAEFEWENKVAVNTNISDLRKFLEHVIKCTNMKCLTPEKALQGDCGFMAANLYAKSIFG
EDVLANLSIEKPAHLSPDTPVQGHVRIRAKSQGMALSMGDKINLSQKANKAIQPEQ
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggcgacattggcagaacagccatgttatacactgatcaatatacccactgatgcggag
ccaccaactgagatgcaacttcgtacagaccttgagaagggtgatgtgaagactaaaaca
gaagctttaaagaagacgatacagatgattctaaatggagagaagatgccatcattactt
atgacaattatccgctttgtgatgccgatgcaggatcacatgattaagaagttgctgctg
atattctgggaggtggtaccaaagtacacacctgacgggaaaatgttacacgagttcatc
cttgtctgtgatgcatacagaaaggacttgcaacatccaaatgagtttatccaagggtcc
actctgagatttctgtgtaaactgaaagaaccagaacttctagagcccctcatgccagct
attagacaatgtttgaaacacagacattcttatgtgcgaaggaattcagtattagccata
tataccatttacaggaactttgacttcctcatccctgatgcaccagaattgatagctgaa
tatttggagggagagcaagatatgtcttgtaaaagaaatgcttttatgatgctgatacat
gcagaccaggaaagagctttgaattacctaagtagctgtatagatcaagtgacatcattt
ggagacattctacaacttgtaattgtagaacttatttacaaggtttgtcatgccaatcca
tcagagcgtgcacgtttcattagatgtatttataatctgttaaactcatcaagtcctgct
gtaaggtatgaggctgctggaacccttgtgacactgtctagtgcacccactgccatcaag
gctgctgcaagttgttacattgagctagttgtgaaagagagtgataacaatgttaaactg
attgtcttagacagacttgtggccttgaaagaggttcctgcccatgagaaagtcttacag
gaacttgttatggacatattgagagttttgaactctccagatcaagaggtgagaaagaag
acattgaatctagctctagatcttgtgacatcaaggagtgtggaagagatggtgctagtg
ttgaaaaaagaagtggtgaaaacaaacaatgtagagcacgaggatacagggaagtacagg
cagttactggtcagaactcttcatcaactctccatcaagttcccagacattgctacaact
atcatacctgtgttgatagaattccttggtgacagtaatgaggcagcagccgctgatgtg
ctcgtgtttatccgtgaggcgatacacaggtttgagtctctcaggagccttatcatcagc
aaactactggatgtgttctctactataaaggctatgaagatacaaagagctgccttgtgg
attctaggagaatattgtacaacatcagaggatatccagggtgtaatgactctagttaga
caatctctaggagagattcctattgttgatgatgaactgaagaaagctgctggagaagta
tcagaagatgatacaatgtctggaggaaatatacaaagattagttacagcagacggcaca
tatgctacacaaagtgcatttagtacagtctctacaaggaaaaaggaagagaatcctcca
ctgcgtcagtttttgctggatggagatttttttgtgggtgctgccctggcaacatcactt
acaaaacttgcccttagatacatgacaattcatacagaccctaaaaggcaaaatgctttt
ctggctgaatctatgttcatcatggccactgttctacatcttggcaagtctggtataccc
acaaagccaatcactgatgatgatgtagatcgtatagcgacgtgtttacgtgtactctcg
gagcagagtgctctgatgaccgatatatttaacacagcctcacgtaactctctctcacta
atgctgcaagccaaaatggccgaggagaaagaggctctgcaggctgctgagaagaaggtg
gttaaagtacaggcagatgatcctatagcatttgctcagcttatcaacaagaatgagcta
ggagctactgagaatatgtttgagctgacactgtcccaagctttagggatgacaaacaaa
aaggagaaagatccaattggagcttctaaacttaataaggtgacacagttgactggtttc
tcagatccggtgtatgcggaggcgtatgtaaatgtgaaccagtttgatatcgtacttgat
gttcttgttgttaaccagactgcagataccttacagaacctaactcttgaactggcaaca
cttggagatttaaaactagtagagaagccccagccactgaccatggctccacatgatttc
tgtaacatcaaggctaatgtcaaggtggcttctacagaaaatggaataatctttggaaat
attgtatatgatgtaactggggcggccagtgatagaaatgttgttgttctaaatgatatt
cacattgacataatggactacattgtcccagcgtcctgtaatgactccgagttccgacag
atgtgggcggagtttgagtgggagaacaaagtggctgtgaataccaatatttctgacctg
aggaaattcctggaacatgtcataaagtgtacaaatatgaaatgtttaacaccagaaaag
gctttacaaggagattgtggatttatggcagctaacctgtatgccaagtctatatttgga
gaagatgtgttagctaatctgagcatagagaagccagcacacctatcacctgatacacct
gtacaggggcatgtcagaattagagctaagagtcagggtatggcattaagtatgggagac
aaaatcaacctgtcacagaaagccaataaagctatccagccggaacaatag
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