Ruditapes philippinarum (Manila clam): 132749545
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Entry
132749545 CDS
T09557
Name
(RefSeq) integrator complex subunit 6-like
KO
K13143
integrator complex subunit 6
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rphi03041
]
132749545
Spliceosome [BR:
rphi03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
132749545
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_INTS6
INT_SG_DDX_CT_C
VWA_2
Flt3_lig
Motif
Other DBs
NCBI-GeneID:
132749545
NCBI-ProteinID:
XP_060595337
LinkDB
All DBs
Position
Unknown
AA seq
885 aa
AA seq
DB search
MTIILFLVDTSASMNQRTYLGTSLIDIAKASVENFMKIRARDPNSRWDRYMLLTLEDPPS
NIKAGWKENHATFTAELKNLTAAGITSMGNAMKSCFDLLNVNRMQSGIDTYGQGRCPHYL
EPAVIITLTDGGKLTSFSGVQPELNIPMNTSCVPGHELTKEPFRWDQRIFGLVMRLPGSV
PIDLSSNTFIPSADNHPLDLMCEVTGGRSYAVYNQKMLNAAIESLVSKVQNGVVIQFEKI
GPDPPLLPNELNKLENESMKENQSMNGQIIKMEEEPKAAATPPPSHLPGNTSWHNLRRLI
LVPRSAQKGYSVGHWPIPESFWPDNTNQTLAPRSAHPNVQFSCNPCEPMVIDNLPFDKYE
LEPSPLTQYILERRQPNVCWQVFISNSARYSELGHPFGYIKASSTLSSVNLFVMPYNYPV
LLPLLDELFKVHKLKPSPQWRQRFDNYIKTMPGYYAQPLKRALARMGAHNLVPENMDNCL
SYSVITYLKKLKNMAKMEMDRLVASVGSKVPPHEGIKVSSRTKTSVLQRKDFSQLLKNVG
GNLSSLKQELTDYNTFTIAVPDREIKPQQFRNPYDIPRKSLLDQIARMKTNFLQTSYTNK
TKLSDTDELHSVPIGQMGNYQEYLKKIYSESPPLRQLENTPTRVHMFGNPFKVNKNIMVD
EAEDSMLGGQQSQKKRNMDAAPGSPGPRKRKPGPLPKDTPIRRPKTPPVVPKVEKLELQP
MSPIKEESDSEPESPSPKDFDMKPVIKEEPVEINHVYHSDSDTSFTNHVTELKNGRISPE
SPTNEKTVINNKHNNKLNHKKDLKVWNHNVSLRQLVVKEIRKPGRRYDTLFEHMNKVQGS
YEIKCAFVQEIIHEAGRFKKKVLIDLLEKFERSLTQHSKTNDKFR
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgacaataatattgtttcttgtagacaccagtgcgtctatgaatcagcgcacatactta
ggaacctctttgatcgacatagcgaaagcatcagtcgagaattttatgaagataagagct
cgcgatccaaacagtcggtgggacaggtacatgcttttgactttggaggatcccccgtca
aatatcaaggcaggttggaaggagaatcatgcaacattcactgctgagttgaagaatctg
acagcagctgggataacctctatgggaaatgcaatgaaaagttgttttgatttgctcaat
gttaatcgaatgcaatctggaattgacacatatgggcagggaagatgtcctcactattta
gaacctgcagtgatcattacacttactgatggtggaaaacttacctcttttagtggtgtt
cagccagagttgaatattcccatgaacacatcttgcgtccctggtcatgagttgacaaag
gaaccgttccgatgggatcaacgaatatttggccttgtaatgaggttacctggcagcgtg
ccaattgatcttagtagtaatacatttatcccatcagcagataatcatccactagatctg
atgtgtgaagttacaggaggtcgttcatatgcagtttataatcaaaagatgttaaatgca
gcaatagaaagtcttgtgtctaaagtacaaaatggcgtagtaatacaatttgaaaaaata
ggtcctgatccaccattgttgccaaatgaactaaacaagctggagaacgagagtatgaaa
gaaaatcaaagtatgaatggtcagataatcaaaatggaggaggagccaaaagctgcagcc
acacccccaccctcccatttaccgggaaacacaagttggcataacctacggcgtttgata
ttagtaccacggtcagcgcagaaaggttattctgttggtcactggccaataccagagtct
ttctggccagataatacaaatcaaactttggcaccaagatcagcgcatccaaatgttcaa
ttctcgtgcaatccctgtgagccaatggttatagacaatctaccttttgataaatacgaa
ctcgaaccctcaccccttacgcagtatatattggagcgtagacaaccaaatgtttgctgg
caggtttttataagtaacagtgctagatatagtgaacttggacatccttttggatatata
aaagccagtagtacattgtctagtgtcaatttatttgtgatgccctataattatccagtg
ttattaccattgttagatgagttatttaaggttcacaaattaaagccgtcccctcagtgg
agacagaggtttgataactatattaaaactatgccaggatactatgcacagccattgaag
agagcgttagctagaatgggagctcataatctagtaccagagaacatggacaattgtctt
tcatatagtgtgatcacctatctaaagaaattgaaaaatatggccaagatggagatggac
agattagtggcatctgttggttctaaagttccgccacacgagggtattaaagttagctca
agaacaaagacatctgtattacaaagaaaggattttagccaattactgaagaatgttgga
gggaatttatccagccttaaacaggagcttacagattacaacacatttactatagctgta
cctgatagagaaattaaacctcaacaatttaggaatccgtatgatattccgcggaagagt
ttattggatcagatagctaggatgaaaaccaatttcctacagacatcatataccaataaa
acaaaactttcagacactgatgaattacatagtgtgcccatagggcaaatgggtaattac
caagaatacctcaaaaaaatatatagtgaatcgccgccactacggcagttagaaaataca
ccaactagagtccatatgtttggaaatcctttcaaagttaacaagaacatcatggtagat
gaggctgaagactctatgttagggggccagcagtctcagaaaaagagaaatatggatgct
gcaccagggtcacccggacctcggaaaagaaaaccagggccgctacccaaagacactcca
atacgacgtccaaaaacaccaccagttgttcccaaagtggaaaagttggagctgcaacca
atgtctccaataaaagaggaatctgattcagaaccagaatcgccatcacccaaagacttt
gatatgaaacctgtgataaaggaggagccagtagaaataaatcatgtgtatcatagtgac
agtgacacttcatttaccaatcatgttacagaattaaaaaatgggcggattagtccagaa
tccccaaccaatgagaaaacagtgataaataataaacataataacaaattgaatcataag
aaagacttgaaagtgtggaaccataatgtgtcattacggcagcttgtagtgaaagaaatt
aggaaacctggaagaagatatgacactctgtttgaacatatgaacaaagttcagggaagt
tatgaaattaagtgtgcctttgtccaggagattattcacgaggcaggaaggttcaagaag
aaagtgctcattgacttgttggaaaagttcgaaagatctttgactcaacattccaaaacg
aatgataaatttagatga
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