Ruditapes philippinarum (Manila clam): 132749547
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Entry
132749547 CDS
T09557
Name
(RefSeq) cohesin subunit SA-1-like isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rphi03036
]
132749547
Chromosome and associated proteins [BR:
rphi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
132749547
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
INTS7_N
Motif
Other DBs
NCBI-GeneID:
132749547
NCBI-ProteinID:
XP_060595339
LinkDB
All DBs
Position
Unknown
AA seq
1220 aa
AA seq
DB search
MMPGVRPRRAAHDAVQSMAEPGSELSMDNDHDNDSDEEMAVVRPLTSGRGRKKKTDGTTV
SRRGRGGGRGRGRVAAHVEEEEGGGSLFEIVKAGRASLQTVVDDWIENYKSDRDSSLLEL
IQFFIQCSGCKGKITPFMYSNMEHAEIIRKMTEEFDEDSGDYPLIMTGPSWKKFKPNYCE
FVQVLVRQCQYSIIYDQYMMDNVISLLTGLTDSQVRAFRHTSTLAAMKLMTALVDVALNL
SINLDNTQRQYEAERQKTKNKQATERLNLLLVKRQELEENQAEIRNMLTYIFKGVFVHRY
RDTQAEIRSICMKEIGVWMKKYPNMFLDDGYLKYVGWTLYDKVGDVRLGCLKALYPLYDT
SDLCHKLEYFTNRFKDRIVEMTLDKETEVAVQGVKLVISILNSFGDAVLSDKDCENVYEL
VYSSHRQVAQAAGEFLNAKLFRHEDDDATVAKTAKGKKRSPNTPLIRDLVQFFIESELHE
HGAYLVDSLWDINPMMKDWECMTDLLLEEPGKNEEALDDKQETSLIEIMVCCVKQAATGE
SPVGRGHGKQKLTAKEKQSVQDDKTKLTEHFISALPQLLLKYLMDPEKVSNLLQIPQYFD
LEIYTSSRQEKNLESLLRYLHEIVEKHTDQEVLESCSKCFECLCDEAYAISGKCDVARKT
LIDSLVVKFKEAMQDFFAEGEQPDEDEVYALIAALKRLYAFSCCHDLSSWDLWDDMFHIV
RLASENVELADEIVSKAQTTIHMLLLWNLRLIEENSNPDYVQTIKKHQMTFMRYLHQLLY
HSRDRISEDAYVTICDSLIIFSKNLGEKEMLRPLVFEPEKSLQNQLSSFLMDKVFLEDDD
DDVDENIKIEELHKRRNFLACFCKLIVYNVLNIKVAAPMFKHYMKFYNDYGDIIKATMSK
AREINKVHTAKTLIMSLTQLFKELQDEQRGMIDRSSDAFQSIKELARRFSLSFGLDQVKN
REAVAAMHRDGILFSINNVDPNDLSKAPPNISFLEVLCEFTNKLMKQDKKTVLNYLDKQL
AGVPPISRNSEDWQALLTYRNSLVQGEHEIHPITLKQAAQKRYGKKRNVTNIDGTLAEES
SNQSWDTATPAPGLGMPQHQSTAVKRRRMDEESASEQGSEADFTESSNAGYQHAQAAWMN
QNKGHDRRVEVGYQGQRHPQEMPQLEPETSEPSISEYESPQLSAPPPHYRNMRHLPQQMM
YDDGSQSIDDASSDYGQQGY
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgatgcctggggtacgacccaggagagctgcccatgatgcagtacaaagtatggcagag
cctggatctgaattatccatggacaatgatcatgataatgacagtgatgaggaaatggca
gttgtacgtcctctgaccagcggccgtggcaggaaaaagaaaactgatggaactacggta
tcaagacgtggtagaggtggtggtaggggtagaggtcgtgtagctgctcacgttgaagag
gaagaaggtggcggatctttgtttgagatagtcaaggcagggagggcttctctacagact
gttgtggatgattggatagagaactataaatccgacagagattcttcgttacttgagctt
atacagttcttcatacagtgctctggctgtaaaggaaagataactccgttcatgtattcc
aacatggaacatgcagagatcattaggaaaatgacagaagaatttgatgaggacagtgga
gattatcccctcattatgacgggtccgtcatggaagaaatttaagcccaattactgtgag
tttgtgcaggttcttgtacgacagtgccagtacagtatcatttatgaccagtacatgatg
gataatgtcatatcattattaactggacttactgactcacaggtcagagctttcagacac
acaagcacattggcagcgatgaaactaatgacggccctcgtagacgttgctttaaacctc
agtataaatttggacaacacacagagacagtatgaagctgaacgacagaaaaccaaaaac
aaacaagccacagaacgtctgaatttactcctagtcaaacgtcaagaattggaagaaaat
caagctgaaattagaaatatgctgacatacatttttaaaggagtatttgtccatagatac
agggatacacaggcggagatcaggtcaatctgtatgaaggagattggagtatggatgaag
aaatatcccaacatgttccttgatgatggttacctcaaatatgttggctggactttatat
gataaggttggggatgtaagacttggttgtctaaaagcgttatatcctttgtatgataca
tcagatctctgtcataaattggagtacttcacaaacaggttcaaggatcgtatagtggaa
atgacacttgataaagagacagaagtggcggtacaaggtgtaaaattagtcatcagtatt
ctaaatagttttggtgatgcagtgttgagtgacaaagattgtgagaatgtgtatgaactg
gtgtattcatcccatagacaggttgcgcaagcagctggagagtttctgaatgccaagttg
ttcagacatgaggacgatgatgccactgttgctaaaacagcgaaggggaaaaagagaagt
ccaaatacacctctcatcagagatctggttcaattcttcattgaaagtgagttacacgaa
catggagcataccttgttgacagcctgtgggatatcaatccaatgatgaaagattgggaa
tgtatgactgatctactccttgaagaaccaggcaaaaatgaagaagccctagatgacaag
caggaaactagtttgatagagatcatggtatgttgtgtaaaacaggcagccactggtgaa
tcccctgttggtagagggcatggtaaacaaaagttaacagcaaaagagaagcagtcagta
caagatgacaagacaaagttgacagaacattttatttcagcgcttccacagctcttattg
aagtacttgatggatccagagaaagtttctaatctactacagatcccccagtactttgat
ctagaaatttacacctccagtagacaggaaaagaatttagagagcttattgagatactta
catgagatagtagagaagcatactgatcaggaagtactggaatcatgctctaaatgtttt
gagtgtttgtgtgacgaggcttacgctatcagtggtaaatgtgatgttgccagaaaaaca
ctcattgacagcctggtggtgaaattcaaagaagcaatgcaggacttctttgctgaggga
gagcaacctgatgaagatgaagtttatgcattgattgcagcccttaaaagactgtatgct
ttctcatgttgtcacgatctgagttcatgggacctttgggatgacatgttccacattgta
cgtctcgcttcggagaatgtggaactggccgacgagattgttagtaaagctcagacaacc
atacacatgttgttactgtggaacttgcgactcatcgaggaaaactctaacccagattat
gttcaaaccattaaaaaacatcaaatgactttcatgagatacctacatcagttgttatac
catagtagagatagaatcagtgaagatgcatatgttaccatatgtgactcactaatcatc
ttcagtaagaatttaggagagaaggaaatgttgcgaccacttgtatttgaaccagagaaa
agtttacaaaaccagctgagctcatttctaatggacaaagtcttcctagaggatgatgat
gatgatgttgatgagaatataaagattgaagaacttcacaagagaagaaacttcctggct
tgtttttgtaaactgattgtctataatgttcttaatatcaaggtggcagctcccatgttc
aaacattatatgaagttttacaacgattatggtgacatcataaaggcgactatgagtaaa
gcacgagaaatcaacaaagttcatacagctaaaacgttaatcatgagtctcacacagtta
ttcaaagagctacaagatgaacaaaggggcatgatagacagatcatcagacgcctttcaa
tccatcaaggaattggcacgaagattctcactctcatttggactggaccaggttaagaac
agggaagctgttgcagccatgcatagagatggtatattgttcagtatcaacaatgttgac
cctaatgacctcagtaaagccccgcccaatatatcatttctggaggtactgtgtgagttt
accaacaaacttatgaaacaggataagaagacagtgttgaactatttggacaaacagttg
gcaggtgttccaccaatatcgaggaactcggaagactggcaagccctgcttacatatcgt
aacagcttggtacagggagaacatgaaatacatcctatcaccctgaaacaggccgcacag
aaacgttacggcaagaagagaaatgtcaccaatattgatggaacactagcagaagaatca
tctaaccaaagttgggacacggcaaccccagcacctggtcttggtatgcctcagcatcag
tccacggcagtgaaacgacgtagaatggatgaggaaagtgcgtcagaacaaggttctgaa
gctgatttcacagaatcttccaacgccgggtaccaacatgcccaggctgcatggatgaac
cagaacaaaggtcatgacaggcgagttgaggttgggtaccagggtcagagacatccacag
gagatgcctcagttagaaccggagacgagtgaaccgagcatctcagagtacgagagtccg
cagctgtcggctccgcccccacattaccgaaacatgcgacacctcccgcagcagatgatg
tatgacgacggatcacaaagtatcgatgatgcctcttcagactatggccagcagggatat
taa
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