Ruditapes philippinarum (Manila clam): 132750103
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Entry
132750103 CDS
T09557
Name
(RefSeq) retinoblastoma-binding protein 5 homolog isoform X1
KO
K14961
COMPASS component SWD1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rphi03036
]
132750103
Chromosome and associated proteins [BR:
rphi03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
132750103
COMPASS/SET1 complex (yeast)
132750103
MLL-HCF complex
132750103
MLL3/MLL4 complex
132750103
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WDR55
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
EIF3I
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
WDR54
Beta-prop_LRRK2
Beta-prop_NUP159_NUP214
Beta-prop_WDR75_2nd
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_Vps41
Frtz
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Saf4_Yju2
Motif
Other DBs
NCBI-GeneID:
132750103
NCBI-ProteinID:
XP_060596024
LinkDB
All DBs
Position
Unknown
AA seq
506 aa
AA seq
DB search
MESFRVLQENFQLSESFGQNYPEDFDGTLDCVSIAITCAFNRQGTILAVGCNDGRLVLWD
FLTRGIAKIINAHVHPVCTLSWSRNGRKLLSAATDNTVSLWDVLSGEVEKTFRFPSPILK
VQFHPRSSEKFLVCPMKHAAVSMDMEGSHKLVPLDEDSDLNIMASYDRRGKCIYTGNAKG
RVCVFTEDDHKLKASFRVTTGTLNTTAIKSIEFARRGDCFLVNSADRVIRVYESGEILAC
GKDGEPEPIQKLQDLVNKTMWKKCCFSGDGEYIVAGSAKQHSLYIWEKSVGNLVKILHGT
KGELLLDVAWHPVRPIIASISSGVVSVWAQNQVENWSAFAPDFKELDENVEYDERESEFD
IEEEGKEKEDFKEEEEDVEVDVTTVNAIQAFVSSDEEEEDTEALMYLPVAPEIEEPEEGW
PVVSEMPQHTEESQTRPEKRKNSQQTPDSTKKSKLKPFDVDLENAPSDEIHPLLNVKKPN
EKVHKKPGTKTKQKSGKSDRSKHKGD
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggaaagttttagagttttgcaagaaaactttcaactgagtgaatcatttggacaaaat
tatcctgaggattttgatggcacattagactgtgttagtattgccatcacctgtgcattt
aacagacagggaaccattctagcagtaggatgtaatgatggtagactggttctttgggat
ttcctaacacgtggcatagctaaaatcattaatgctcatgtacacccagtctgtactcta
agttggagcagaaatggccgtaaactgctaagtgccgccaccgacaacacagtgtcatta
tgggatgttttgtccggagaggttgagaaaacattccggtttccgtcccctattctcaaa
gtacagtttcaccctagaagcagtgagaagtttttggtatgtccaatgaaacatgctgct
gtaagcatggatatggagggatcacacaagcttgttcctttagatgaagattcagattta
aatataatggcatcctatgatagacgagggaaatgtatctatacaggaaatgcaaaagga
agggtttgtgtatttacggaggatgatcataaattaaaggcttcatttagagtgacaact
gggacattaaatacaacagctattaaatctatagagtttgcaagacgtggcgattgtttc
ctggtaaattcagcggatcgtgtaatacgtgtgtatgaaagtggagagattctagcttgt
ggtaaagatggcgaaccagaacctatacaaaaattacaagatcttgttaataagacaatg
tggaagaagtgttgtttttcgggtgatggagaatatatagttgcaggttcagctaaacaa
cattctctgtatatatgggagaaaagtgtcggtaacttggtcaaaattttacatggaaca
aaaggagagcttttattagatgtggcatggcatccagtacgacctatcatagcttctata
tcaagtggtgtggtatctgtttgggcacagaatcaagttgaaaactggagtgcttttgca
ccagatttcaaagaacttgatgaaaatgtagaatatgatgagagagaatctgaatttgat
atcgaagaagaaggcaaagagaaagaagattttaaagaggaggaagaagatgttgaggtt
gatgttaccacagttaatgcaatacaggcatttgttagcagtgatgaggaagaagaagat
acagaagctttgatgtatttacctgttgccccggagatagaagaacccgaggaaggctgg
cctgttgtatcagaaatgccccagcatacagaggaatctcagaccagacctgagaagaga
aaaaatagtcaacaaacacctgactctactaaaaaatcaaagttaaaaccatttgatgtt
gaccttgaaaatgccccctcagatgaaatacatcctttattaaatgtgaagaaaccaaat
gagaaagttcataagaaaccaggcacaaaaacgaaacagaaatctggcaaatctgacaga
tccaaacataaaggagattga
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