KEGG   Ruditapes philippinarum (Manila clam): 132750249
Entry
132750249         CDS       T09557                                 
Name
(RefSeq) replication factor C subunit 5-like
  KO
K10756  replication factor C subunit 3/5
Organism
rphi  Ruditapes philippinarum (Manila clam)
Pathway
rphi03030  DNA replication
rphi03410  Base excision repair
rphi03420  Nucleotide excision repair
rphi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    132750249
   03410 Base excision repair
    132750249
   03420 Nucleotide excision repair
    132750249
   03430 Mismatch repair
    132750249
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rphi03032]
    132750249
   03036 Chromosome and associated proteins [BR:rphi03036]
    132750249
   03400 DNA repair and recombination proteins [BR:rphi03400]
    132750249
DNA replication proteins [BR:rphi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    132750249
  DNA Replication Termination Factors
   ELG1-RFC complex
    132750249
Chromosome and associated proteins [BR:rphi03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    132750249
DNA repair and recombination proteins [BR:rphi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     132750249
  Check point factors
   HRAD17(Rad24)-RFC complex
    132750249
SSDB
Motif
Pfam: Rep_fac_C DNA_pol3_delta2 RCF1-5-like_lid AAA AAA_lid_RFC1 AAA_assoc_2 DNAX_ATPase_lid DEAD SirC_C PCI Thioredoxin_6
Other DBs
NCBI-GeneID: 132750249
NCBI-ProteinID: XP_060596174
LinkDB
Position
Unknown
AA seq 265 aa
MYTPSEFHSMVLELNASDDRGIGIVRGQILSFASTRTIFKKGFKLVILDEADAMTRDAQN
SLRRVIEKFTDNVRFCIICNYLSKIIPALQSRCTRFRFAPLSTEQMVPRLEHVIRAEGVN
ISPDGMQAVVTLANGDMRKSLNILQSCFMAYDEISEDSVYMCVGHPLRKDIENIMYWILN
ENFTTAYNNLMNLKTAKGLALQDILTEVHQYVHKVDLPMHVRLHLLEKMAEVEYRLSSGT
NEKIQLSSLIAAFQVTRDMIVEEAK
NT seq 798 nt   +upstreamnt  +downstreamnt
atgtataccccttcagagtttcattcgatggtccttgagttaaatgcatcagatgataga
ggtataggtattgttcgaggacagattctgagttttgccagcacaaggacaatctttaag
aaggggtttaaacttgtgatattagatgaggctgatgcaatgaccagagatgcccagaac
tcccttaggagagtgatagagaagtttacagataatgtccggttttgtataatctgtaac
tacctgtcaaagattataccagcgttacagtctcggtgtacgaggttccggtttgctcct
ctgtctacagaacagatggtaccgaggctcgaacatgtcatcagagctgaaggtgtaaat
atatcaccagatggaatgcaagccgtggttacactggccaacggtgatatgaggaaatct
ctaaatatattacagagttgttttatggcatatgatgagatcagtgaagatagtgtttat
atgtgtgttggacatcctctacggaaagacattgaaaatataatgtactggatattgaat
gaaaactttaccactgcttataacaatttaatgaatttaaaaacagcaaagggattggca
ttgcaagatattttaacagaagtacatcagtatgttcataaagtggatttgccaatgcat
gttcgacttcacctccttgagaaaatggcagaagttgaatacaggctgtcatcgggaaca
aatgagaagatacaattaagttcactgatagcagcatttcaagtaactcgagatatgatc
gtggaggaagccaaatga

DBGET integrated database retrieval system