Ruditapes philippinarum (Manila clam): 132750404
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Entry
132750404 CDS
T09557
Name
(RefSeq) rab proteins geranylgeranyltransferase component A-like
KO
K23460
Rab proteins geranylgeranyltransferase component A
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rphi01006
]
132750404
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132750404
Prenyltransferases [BR:
rphi01006
]
Protein prenylation
Rab geranylgeranyltransferase
132750404
Membrane trafficking [BR:
rphi04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
132750404
Endosome - Lysosome transport
Rab GTPases and associated proteins
132750404
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GDI
RAE1_2_domI_C
NAD_binding_8
Motif
Other DBs
NCBI-GeneID:
132750404
NCBI-ProteinID:
XP_060596354
LinkDB
All DBs
Position
Unknown
AA seq
814 aa
AA seq
DB search
MLNMAMTDDLSKEFDVIVLGTGMPESIVAAACSRIGQTVLHLDKNDHYSGDWASFNLQGI
EKWAQQHMDTKEAKENDIARPSLDESSLLDEGETLIELPLNNTNFSNTQVQNYLPDTDED
DNVQESEVAGSKLTDESPKHCDINDTKNTESGDGTNNKTCAEIDKCDTRLIDQQESSVEK
QADCAIDSEVQSMKEQVENLQLTDDESKRLEKLETDVQDNLSESKQDSGESKNMDYKATE
EKLNERQDSKSKLRWTAKRLKEEWRKFNLDLSPKVLYSVGDMVELLISSDIAKYCEFKTI
TQVITLMNGNLERVPCSRADVFSSKKVSMLEKRMLMKFLQYCLQYENKPEELGDFLEKPF
SDFLSHKKLTPTIKHYIQHSIAMATESMTTKEGLEKTKKFLQSLGRYGNTAFLWSLYGSG
ELPQSFCRMCAVFGGVYCLRMTASSIVIDSENKCCGVITTEGHKIKCKWLIMEGSYAPEN
YLDQKHNRRKISRGIIMTETPLLTTSQQEQLSLMNLPCPDDGDRPITILELPPSSLAAPP
GVFVYHLSRKSKDDVLPKDDLNFAINTLFSHEENKHENKPAMIWSLYFTQTDMSEVQGSS
IIPDNVILMSGPGIEIDIDTPVLQARKVFKKILPDEEFLPKAPNPEDIIYVDDSEAQIAD
GNTLSEFSEKEDSGSSQEIDQSELSNTSESQSKPEGVDQSELSNTEESQSKSEGIHQLEA
SNIGKSQSNTEGVDQSEMSKTDESQSITGGVDQSEMSKTGESQSKPEGVDQSIMSKTGES
QSITGGVEHTLDPKTETDQVKEDHVQSEKKKLKI
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgctaaacatggcgatgactgacgacttgtcaaaagaatttgacgtgattgttctcggc
acaggtatgccagaaagtattgttgctgctgcatgttcaaggataggacagacagtgctt
catctggacaagaatgatcactatagtggggattgggcatcttttaatctacagggcata
gaaaaatgggcacagcaacatatggatacaaaagaagccaaagaaaatgatattgcacgg
ccatctttagatgagagtagtcttctagacgagggggaaacattgattgaattacctcta
aacaacacaaacttttctaatacacaagtccagaactaccttccggatacagatgaagat
gataatgtacaagaaagtgaagttgctgggtctaaacttactgatgagtcacccaaacac
tgtgatataaatgatacaaaaaatactgaaagtggagatggtactaataataaaacatgt
gctgagatagataaatgtgacacaagattgattgatcaacaggagagttctgtggagaaa
caagctgattgtgctatagatagtgaagttcagagtatgaaagagcaagtagagaatctt
cagttaaccgatgatgaaagtaaaagattagaaaagcttgaaacagatgtacaagataac
ttaagtgaaagtaaacaagatagtggagaaagcaaaaatatggattataaagcaactgaa
gaaaagctaaatgaaaggcaggatagtaaatctaaattgagatggacagcaaagagattg
aaagaagaatggcgaaagtttaatttagacctgtcaccaaaggtactatactctgtggga
gacatggttgaattattgatatcttcagatattgccaaatattgtgaatttaaaaccatc
actcaagttattactttgatgaatggaaatcttgagagggtaccatgttctagagcagat
gtgttcagcagtaagaaagtgagcatgttggaaaagagaatgttgatgaaattccttcag
tattgtctacagtatgagaacaaacctgaagaattaggagattttctagagaaaccattc
tcagattttttatcccacaagaagctcactccaactatcaaacattatattcaacactcc
attgccatggcaactgaatctatgaccacaaaagagggattagaaaagacaaagaagttt
ttacagtcacttggtcgctatggtaacacagcatttctatggtcactgtatggaagtggg
gaacttccacagagcttctgcagaatgtgtgcagtgtttggtggtgtgtattgcctcaga
atgacagcatcttccattgtcattgattcagaaaataagtgttgtggagtgataaccaca
gaaggacataaaattaaatgcaagtggctcattatggaaggtagctatgcaccagaaaat
tacttagatcagaaacataacagaaggaagatatctagaggaattattatgacagagact
ccactgctgaccacaagtcaacaagagcaattatcactgatgaacctgccatgtccagat
gatggtgatagaccaattactatactagaacttccgccatctagtttggctgctccacct
ggtgtctttgtgtaccatttatcaaggaaaagtaaagatgatgtattacctaaagatgat
cttaattttgctatcaatacattattttcacatgaggaaaacaagcacgagaacaaacca
gctatgatatggtcactttacttcacacaaactgatatgtcagaagttcagggcagtagc
atcattccagacaatgttatcctcatgtcagggcctggtattgaaatagacattgataca
ccggtacttcaggctagaaaggtatttaaaaagattttacctgatgaagaatttttacca
aaagctcctaatcctgaagacattatttatgttgatgattctgaagcacagatagcagat
ggcaacactctgtcagaattctctgagaaagaagattcaggaagctctcaggaaatagac
caatcagaattgtctaatacaagtgaaagccaatcaaaacctgagggagttgaccaatca
gaattgtccaatacagaggaaagtcagtcaaaatctgagggaattcaccaattagaagcg
tccaatataggtaaaagccaatcaaacactgagggagttgaccaatcagaaatgtccaaa
acagatgaaagccagtcaataactggtggagttgaccaatcagaaatgtccaaaacaggt
gaaagtcagtcaaaacctgagggagttgaccaatcaataatgtccaaaacaggtgaaagc
cagtcaataactggtggagttgagcatactttagatcccaaaacagagactgaccaagta
aaagaagatcatgttcaaagtgaaaagaaaaaattgaaaatttga
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