Ruditapes philippinarum (Manila clam): 132750443
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Entry
132750443 CDS
T09557
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD-like
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rphi01002
]
132750443
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rphi04121
]
132750443
Enzymes [BR:
rphi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
132750443
Peptidases and inhibitors [BR:
rphi01002
]
Cysteine peptidases
Family C67
132750443
Ubiquitin system [BR:
rphi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
132750443
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
132750443
NCBI-ProteinID:
XP_060596415
LinkDB
All DBs
Position
Unknown
AA seq
838 aa
AA seq
DB search
MSSERFCILLAKCLGKKKEKKLLKSSTSKVEILPGTLLLFLDIVKNSSNHLQFVLETLDQ
EDVEVTCDRDDFNEISKEEYELLISVPTCADRYQIFLNKEWMQEGQKLKVGDYVEVYDKA
SAKDLIGILRYRGHVQGVSGIHFGVELVYNKGQGHSDGLFRNQRYFTCSSESALFVGLHR
IRQHKGLPPPQRQSEPAGACGTSVYSQYGKANAYGLKKGFDKYCLDKVTMALTGDNPVGS
GTGKYRDQRLFTAKQNHASLVPILGLMKEEEYMNESRPVPQLINQNKLALKVQYNDDYLL
ILNIYIFSEYLNEGLGEVLTGQGSQGNNSRHKPSPEPDPELGLGSLVEVMSTKPLYGLIK
WIGHLPDQKEPKKLIAGLEMEEETTAGTDGTFGSHRLFNCPPRKGLFVPLYKCRKDKRFM
DERQMRSPSADRSINFGSTETPDLPGTVSPPTSLENISLVCGKGRGIQGHHNSCYMDATL
LAMFYFTTVFDSILHRPKTSADLKEYTEVQQVLKEGIVNPLRRHHYVRADKMMKLRKLLD
KVGKIPGMMSEEKDPEEFLNLLLNEITKADPFLKICAEDNQETQHTYFYQLIMEKDERLV
LPTTQQLFELSFLQIGIKLKEVPSCLIIQMPRFGKDYKMYKRILPSLELDITDVLENAPR
ECIICGDLAAYECKECYQVHGAGLNTIAFCDGCKRTSHQHKLRVNHSCRKISVPPAYHDY
YMRKKDEGKPVPIPREKMELFAVICIQTSHYVSFVKTGKGRDAKWIFFDSMADRMGEQSG
YNIPEVRECSDIPRWLSDECYSDIMKYPEDKTLPEHMRRLFCDAYICMYQSPQVMMFK
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtgaaagattttgtattttgttagcaaaatgtcttggtaagaaaaaagagaag
aagttactgaaatcatccacatcaaaggttgaaattttgccaggcacacttttactgttt
ttagatattgtcaaaaattcaagtaatcatttacagtttgtattagaaactctagaccag
gaagatgtagaggtgacttgtgaccgtgatgactttaatgagatcagcaaagaagaatat
gaacttttgataagtgtaccaacatgtgctgatcggtatcaaatctttctgaataaagaa
tggatgcaggaaggacaaaagttaaaagttggagattatgtagaagtttatgataaagcc
tcggcaaaggatttaataggaattctacgttacaggggccatgtacaaggtgttagtgga
attcactttggcgttgagcttgtgtacaataaaggtcaaggccacagtgatggattgttc
agaaatcagcgatacttcacttgttcctcagaatcagccctatttgtaggtctccacaga
atacgtcaacacaaaggtcttccaccaccacagcgccagtctgaaccggctggggcttgt
ggtactagcgtgtacagtcaatatggaaaagcaaatgcatatggacttaaaaaggggttt
gataaatattgtttggataaagtgacgatggccctaacaggggataatccggtgggttct
ggtacaggaaaatatagagatcaaagattgttcacagcgaagcagaaccatgcatctctt
gttccaatcctgggcttaatgaaagaggaggagtatatgaatgaatcaagaccagtgcct
cagctgatcaatcaaaacaagttagctttaaaagttcaatataatgatgattatttgtta
attttaaacatctatattttttcagagtatttgaacgagggtctaggtgaagtgttgaca
ggtcaaggatctcaaggtaataattcacgtcacaagccgtcccctgaaccggacccagag
ctaggactaggctctctggtggaggtcatgtccacaaagccgctttatggcctgatcaag
tggattggacatctaccagaccagaaagaaccaaaaaaattgatagcaggacttgaaatg
gaggaagagacgaccgctggaacagacggaacgttcggaagccataggttatttaattgt
ccccctcgtaaaggattatttgtaccattatataaatgtcgcaaagataaacgtttcatg
gatgaacgtcaaatgagaagtccttctgcggacagaagtattaactttggcagcacagag
actcccgatttacctggaactgtttcgccccctacctccctagaaaatataagtcttgtc
tgtgggaaaggtcgtggaattcaaggtcatcataattcttgttatatggacgctacactt
ttagctatgttctattttacgactgtatttgattctatattacatcgtccaaaaacgtca
gccgatttaaaggaatataccgaggttcagcaagtgttgaaagaaggcattgtgaatcca
ttaagaagacatcactatgtgagagctgataaaatgatgaaattgagaaaattgttagat
aaagttggtaaaatacccggaatgatgagtgaagaaaaagatcctgaagaatttttaaac
ttgctgttaaatgaaataacaaaagcagatccgttcctaaaaatttgtgctgaagacaat
caggagactcagcatacatatttctatcagttgataatggagaaagatgaaagactagtt
ctaccaaccacacaacaattatttgaactttcatttctacagattggtatcaagttaaaa
gaggtaccgtcttgtttaattatacagatgccaaggtttggaaaggattataaaatgtac
aaacgaattcttcctagtcttgagcttgatattacagatgtgttagaaaatgcaccaaga
gagtgtattatatgtggagatttagctgcatatgaatgtaaagaatgttaccaggtccat
ggtgcaggacttaacactatagctttttgtgatggttgcaagagaacgagtcatcaacat
aaattgcgagttaatcatagctgtaggaagataagtgtacctccagcctaccatgattat
tacatgaggaaaaaggacgagggaaaacctgtacctataccgcgtgaaaaaatggaactt
tttgcagtgatctgtatacagaccagtcactatgtctcttttgtaaaaactgggaaaggt
cgggatgctaaatggatcttctttgactccatggcggatagaatgggtgaacaaagtggc
tataatataccggaagttcgcgaatgcagcgatatcccgcgctggttatccgacgaatgt
tacagtgacattatgaagtacccggaagataaaacgctaccggaacatatgagacgactt
ttttgtgacgcttatatctgcatgtaccaaagtcctcaagttatgatgtttaaataa
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integrated database retrieval system
