Ruditapes philippinarum (Manila clam): 132750476
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Entry
132750476 CDS
T09557
Name
(RefSeq) endonuclease 8-like 3
KO
K10569
endonuclease VIII-like 3 [EC:3.2.2.-
4.2.99.18
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
132750476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rphi03400
]
132750476
Enzymes [BR:
rphi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
132750476
DNA repair and recombination proteins [BR:
rphi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
132750476
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_GRF
H2TH
Zn_ribbon_RanBP
Fapy_DNA_glyco
PHF5
Motif
Other DBs
NCBI-GeneID:
132750476
NCBI-ProteinID:
XP_060596458
LinkDB
All DBs
Position
Unknown
AA seq
534 aa
AA seq
DB search
MVEGPGCKLKGLKIKGRLKGQTVVNVKGNATEKYKKKGTDGLSPFHQLIGRSLDGVQTLG
KELFMYFGDLCLRVHFLMAGQSFINNEKVDNDLGGNADTASLELQMSKDLVLFKKSSVDI
RSSEACKQKYDELNDLDICSPVFNFPRAVALVKEQQDRLVCDVLLDQLILPGVGNIIKNE
ALFDSGIKPSSKISELKDEHVSHLIKMTRDFTNIFYQCRRDGKPLHVHYKIYGKKRCKQC
EGKVTICRLGNDNDRVTYFCEGCQTNDLKNKTRKLPMKGSLLGWVKTGNEATTTTTTVIA
DWSCDSCTFINKSTSTACSICLTPKHKPPSLSVAHIEESDDCMILEENCEPVTSVNANRK
KRLSTGNLDVEQPFKTRKLEQNSVDENNSRSKVTKDQSKSSLHAKTHIGLRDKLNQSNGT
GQVKSESNSQSQPVSHKSNSDRISSCKTHKRKCSMKEVRKKGDNLGRWFFSCPVRTCNYF
EWADEKFPLCPGHGKPCTIRIVMKIGPNNGRKFFACKMPKNKQCKFFEWAEGFD
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggtagaaggacctggatgcaaattaaaggggttgaagataaaaggcagactgaaggga
caaacagtggtgaatgtgaaaggaaatgcgacggagaagtataagaagaagggaacagat
gggttatcaccatttcaccaacttatcggcagatcacttgatggtgttcaaactctcgga
aaagaactcttcatgtactttggtgatctatgtctccgagtacattttctgatggctggt
cagtcatttatcaataatgagaaagtggataatgacctaggggggaatgcggacacggcc
agtcttgagctacagatgtcaaaagatcttgtgttgttcaaaaaatcctctgtagatatc
aggtcttcagaggcatgcaaacagaagtatgatgagttgaatgaccttgatatatgttca
cctgtatttaactttcctcgtgcagtagcactggtgaaggaacaacaagatagacttgtc
tgtgatgttctgctggatcaattaattctaccaggtgtcggcaacatcataaaaaatgag
gctctatttgacagtggaataaaacctagttcaaagatatcagagttgaaggatgaacat
gtctctcatcttatcaagatgaccagagactttacaaatatattttaccagtgtagaaga
gatggtaaaccactacatgtacattataagatctatggcaagaagagatgtaagcaatgt
gagggcaaggttactatatgtcgtctaggtaacgacaatgacagggtcacctacttctgt
gagggttgtcagacaaatgatctcaaaaataaaacaagaaagttacctatgaaaggcagt
cttctaggttgggttaagacaggaaatgaggctactacaacaacaacaacagttatagca
gactggtcatgtgacagttgtacatttatcaacaaatccacgtctacagcatgtagtata
tgcctcactccgaaacataaaccaccatcattatctgttgctcatattgaagagtctgat
gattgtatgatattagaagaaaactgtgagcctgttactagtgttaatgccaatagaaag
aaaagattgtcaactgggaatttggatgtagaacagccatttaaaaccagaaaactggaa
caaaatagtgttgatgagaataactctaggtccaaagtgacaaaggaccaatcaaaatca
agtttacatgccaaaacacatattggactgagggataaacttaaccaatcaaatggtacc
ggacaagttaaatcagagtcaaacagccaatcacagccagtgtctcataagagtaacagt
gataggatttcctcatgtaaaactcataaaagaaagtgtagtatgaaagaagtgaggaaa
aagggagacaacttgggaagatggttcttctcgtgtccagttagaacatgcaattacttt
gagtgggcagatgagaagttcccgttgtgtcctggccatggtaaaccctgtacaatacgt
attgtgatgaagataggaccaaataatggcagaaaattcttcgcttgcaagatgccaaaa
aacaaacagtgcaagttctttgaatgggctgaaggttttgattaa
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