Ruditapes philippinarum (Manila clam): 132750562
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Entry
132750562 CDS
T09557
Name
(RefSeq) H/ACA ribonucleoprotein complex subunit DKC1-like
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
132750562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rphi03009
]
132750562
03032 DNA replication proteins [BR:
rphi03032
]
132750562
Ribosome biogenesis [BR:
rphi03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
132750562
Prokaryotic type
132750562
DNA replication proteins [BR:
rphi03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
132750562
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
PUA
TruB_N
UPF0113
DUF5073
SR-25
Motif
Other DBs
NCBI-GeneID:
132750562
NCBI-ProteinID:
XP_060596537
LinkDB
All DBs
Position
Unknown
AA seq
505 aa
AA seq
DB search
MEDGHKKKKNKTVDVAETQHNGDFLIQPSAEVQKLDTSQWPLLLKNFDKLNVKTGKYTPI
PSGCSPLKRPIEDYVKSGFLNLDKPSNPSSHEVVAWVKRILRVNKTGHSGTLDPKVTGCL
IVCIERATRLVKSQQGAGKEYVCIYRLHSVVEDEKKVLRNLEMLQGALFQRPPLISAVKR
QLRIRTVYEVKSLEYAKEDAMGVFWVSCEAGTYIRTMCVHLGLLLGVGGQMQELRRVRSG
IQDEKVGMVTLHDVLDAQWMYDNQRDESYLRRVIKPLEALLTSHKRIVIKDSAVNAVCYG
AKIMLPGVLRYENGIEINEEIVIVTTKGEAVALAIAQMTSAVMATTDHNIVAKIKRVIME
RDTYPRKWGLGPRAMIKKQMVKEGKLDKYGKPNDSTPKAWMEILKKSGDLNENEDIKPAV
NNVDASQGAVKRKHEPGSSSDEGANVSSMSSPKTPTAEGDGHKKKKKKKVKEEQVSSTEE
QVAEPSSEKKKKKKKKHKKEAADSD
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggaagacggtcacaagaagaaaaagaacaagacagttgatgttgctgagacacagcat
aatggagactttctcatacaaccatccgcagaagtacagaaattagacacatctcaatgg
cccttgttgctaaagaattttgataaactaaatgtgaagacaggaaaatacacaccaata
ccttctggttgttcaccactcaagcgtccaatagaagactatgtcaagagtggcttttta
aatctcgacaaaccatcaaatccctcttcacatgaagttgtagcatgggttaaaagaata
ttgcgtgtaaataaaacgggacacagtggaacattagatccaaaagtaacgggttgttta
attgtttgtatagaacgagcaacaagacttgtgaaatctcaacaaggtgcgggtaaagag
tatgtgtgtatttacagacttcacagcgttgttgaggatgagaagaaagtccttaggaat
ttggaaatgttgcaaggtgcattgtttcaaagacctccattgatatcagcagtgaagagg
cagttaagaataagaaccgtatatgaggtgaaatctctcgagtatgccaaggaagatgct
atgggtgtattctgggtcagctgtgaggcaggcacatacatacgtaccatgtgtgttcat
ttgggacttctactgggagttggaggtcagatgcaggaactaaggcgagttcggtcaggc
atacaagacgaaaaggttggtatggtaacattacatgatgttctggatgctcaatggatg
tatgataaccaaagagatgagagttatctgagacgagtcatcaaacctttagaagcatta
ctcacctcacataagcgaattgtgattaaagactctgctgtgaacgctgtttgctatgga
gccaagatcatgttacccggtgttttaagatatgagaatggtatagaaattaatgaagaa
atcgtcatagtaacaacgaaaggcgaggctgtagcattggccattgctcagatgacatct
gctgtcatggcaacaacagaccacaatattgttgctaagataaaacgtgtgataatggag
agagatacatacccaaggaaatggggactgggaccaagagcaatgataaagaagcagatg
gtcaaggaaggaaagctagataaatatggcaaacccaatgacagtactccgaaagcttgg
atggaaatattaaaaaagtctggagacttgaatgagaatgaagacattaaaccagctgta
aataacgtggatgcgtctcaaggagctgtaaagagaaagcatgagcctggtagtagctcg
gatgagggagccaatgtatcatcaatgtcatcgcctaaaacacccacagctgaaggagac
ggccacaaaaagaagaaaaagaagaaggttaaggaagagcaagtgtcaagtacagaggaa
caagtggcggaaccatcatcagagaaaaagaagaagaagaaaaagaagcacaagaaagag
gcagcagactcggattga
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