Ruditapes philippinarum (Manila clam): 132750970
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Entry
132750970 CDS
T09557
Name
(RefSeq) DNA topoisomerase 3-beta-1-like
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03440
Homologous recombination
rphi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
132750970
03460 Fanconi anemia pathway
132750970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rphi03032
]
132750970
03400 DNA repair and recombination proteins [BR:
rphi03400
]
132750970
Enzymes [BR:
rphi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
132750970
DNA replication proteins [BR:
rphi03032
]
Eukaryotic type
DNA Topoisomerases
132750970
DNA repair and recombination proteins [BR:
rphi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
132750970
FA (Fanconi anemia) pathway
132750970
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
132750970
NCBI-ProteinID:
XP_060597046
LinkDB
All DBs
Position
Unknown
AA seq
860 aa
AA seq
DB search
MRTVLMVAEKPSLAQSIAKILSNGNMTSRKGSNGACSVHEYRARFAPINDTATFKMTSVC
GHVFGLDFIGKYNNWDKVDPVELFQAQTQKKEATEKLHMPSFLQKEARGMDYLVLWLDCD
KEGENICFEVVDCVKGVMNRNVSGCTVFRSHFSAITDTDIRKAMNNLGVPNENEALSVDA
RQELDLRIGCAFTRYQTKYFQGKYGDLDSTLISYGPCQTPTLGFCVDRHDKIQSFKPEPY
WIIQVQVTCEGADRTLNLDWDRVRIFDKEVAQMFMGLIKASDTARVTDITKKEKTKSRPQ
ALNTVEMLRVASSGLGIGPQQTMQIAERLYTQGYISYPRTETTQYPENFDLVGTLKQQQN
HPDWGSAVRDLLNDGIQKPKKGNDVGDHPPITPMKSATESELGHDAFRLYDYITRHFIGT
ISPDCRYLQTVVSFEVGGEHFTFSGKQLIDPGYTALMTWQALSSDEKVPDLKREQQCPVN
DVKLSERLTSPPDYLTEAELITLMEKHGIGTDASIPVHINNICERNYVTIQAGRKLKPTT
LGVVLVHGYQKIDADLVLPTMRSAVEEQLNLIAHGKADYEAVLQHGISIFHLKFKYFVQN
IAGMDELFEVSFSPLAASGKPLSRCGKCRRFMKFIQAKPSRLHCSSCDETYNVPQNGNIK
LYKELKCPLDDFELVLWTTGAKGKTYPLCPYCFNNPPFKDMRKGQGCSECTHPTCQHSVA
HTGVSECVECENGILVLDVTSGPKWRMACNKCNVVINFFENAHKVSLSEDSCEDCGSNLM
EVDFSKGKTPLEDGKTEHTGCVFCDPILKNLVEKHHAKMRVRSAGGRGRGGRGRGRGGRG
RGRGRGKPKDKMAQLAAYFV
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaccgttttaatggtggctgaaaagccatctttggcacagtcaattgccaaaatc
ctgtcaaatggaaatatgacatcaagaaaaggatcaaacggtgcatgctctgtgcacgaa
tacagagctaggtttgcacccatcaatgatactgctacgtttaaaatgacatctgtgtgt
ggacatgtatttggattggactttattggaaaatacaacaactgggataaagttgatccg
gttgaactttttcaagcacaaacccagaaaaaagaagcaacagaaaagttacacatgcct
tcctttcttcaaaaagaagcacgaggaatggattaccttgtactgtggctagattgtgac
aaagagggagaaaatatctgctttgaagtagtagactgtgttaaaggtgtgatgaacaga
aatgtgtcgggatgtactgtgttcagatcccacttcagtgcaattactgatacagatatt
aggaaggcgatgaacaaccttggtgtgccaaatgagaacgaggctttatcagtggatgcc
aggcaggagttagatcttaggataggatgtgcgtttacacgatatcagaccaaatacttt
caggggaagtatggtgacctggacagtacactgatatcatatggaccgtgtcagacacct
acattagggttctgtgtggacagacatgataagatacagtcatttaaacctgagccttac
tggatcatacaagtacaggtgacatgtgaaggagctgataggacgttaaacctagactgg
gatagagtgaggatatttgataaagaagttgctcagatgtttatgggacttattaaggct
tcagatactgcaagagtaacagatataacaaagaaagagaaaacaaagtcaagaccacaa
gctctgaatacagtggagatgttacgagttgccagttcaggattaggtattggtccccag
caaactatgcagatagctgagagattgtacacccagggttatatcagttatcctagaaca
gaaaccacacaatacccagagaactttgatcttgtgggaacattgaaacaacaacagaat
catccagactgggggagtgctgtcagagatttgctaaatgatggaatacagaaaccaaag
aaaggtaatgatgtcggggaccatcctcctattacaccaatgaagtcagctacagagagc
gagctgggacacgatgcctttagactgtatgattacatcactcgacattttattggcact
ataagtccagactgcagatacttgcagacagttgtttcatttgaagtgggtggagaacat
tttaccttcagtggtaaacagctgatagatcccggctacactgccctgatgacctggcag
gctctgtccagtgatgagaaagtaccggacttaaaacgggaacaacagtgtccagtcaat
gatgttaaattgtcagagagactaaccagtccaccggactacctgaccgaggcagagttg
atcaccctcatggagaagcatggaattggaactgatgccagtataccagtccacattaac
aatatctgtgagagaaattacgtaaccattcaggctgggagaaaattgaaacctacaact
cttggtgtggtactcgttcatggttaccagaagattgacgcagatctagtcttaccaaca
atgcgttcagcagtggaggaacaattgaacctgatcgcccacggcaaggccgactatgag
gcagtgctacaacatggcatcagcatatttcacctcaagttcaaatatttcgtacagaat
attgctggaatggatgaactgtttgaagtctccttctcaccccttgctgcatcaggcaaa
cctttgtcaagatgtggtaaatgtcgaagatttatgaagttcattcaggcgaagccaagt
cggctccattgttcttcatgtgacgagacgtataatgtaccacagaatggtaacattaaa
ttatacaaagaactaaagtgtcctctcgatgattttgaattggtgctttggactacagga
gctaagggaaagacctacccgctatgcccatactgcttcaacaacccaccgttcaaagac
atgagaaaaggtcaaggttgtagcgagtgtacacaccctacatgccagcactctgtggct
catacaggtgtgtcagagtgtgtagaatgtgagaatggaatactcgttctggatgtgaca
tcaggacctaaatggagaatggcgtgtaataagtgcaatgttgtcataaacttctttgag
aatgctcataaagtcagtttatcggaagattcttgtgaagattgtggatccaaccttatg
gaggttgattttagcaagggcaagacaccgttagaagatggaaaaacagagcatactggt
tgtgttttttgtgaccctattttgaaaaacttagttgagaaacaccatgccaaaatgaga
gtacggtctgctgggggaaggggtagaggagggcgtggtcgaggtaggggtgggcgtggc
agaggaagagggcgtggcaagccaaaagacaaaatggcacagcttgcagcttattttgta
tag
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integrated database retrieval system
