KEGG   Ruditapes philippinarum (Manila clam): 132750970
Entry
132750970         CDS       T09557                                 
Name
(RefSeq) DNA topoisomerase 3-beta-1-like
  KO
K03165  DNA topoisomerase III [EC:5.6.2.1]
Organism
rphi  Ruditapes philippinarum (Manila clam)
Pathway
rphi03440  Homologous recombination
rphi03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    132750970
   03460 Fanconi anemia pathway
    132750970
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rphi03032]
    132750970
   03400 DNA repair and recombination proteins [BR:rphi03400]
    132750970
Enzymes [BR:rphi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     132750970
DNA replication proteins [BR:rphi03032]
 Eukaryotic type
  DNA Topoisomerases
   132750970
DNA repair and recombination proteins [BR:rphi03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Bloom's syndrome complex (BTR)
     132750970
   FA (Fanconi anemia) pathway
     132750970
SSDB
Motif
Pfam: Topoisom_bac Zn_ribbon_TOP3B Toprim
Other DBs
NCBI-GeneID: 132750970
NCBI-ProteinID: XP_060597046
LinkDB
Position
Unknown
AA seq 860 aa
MRTVLMVAEKPSLAQSIAKILSNGNMTSRKGSNGACSVHEYRARFAPINDTATFKMTSVC
GHVFGLDFIGKYNNWDKVDPVELFQAQTQKKEATEKLHMPSFLQKEARGMDYLVLWLDCD
KEGENICFEVVDCVKGVMNRNVSGCTVFRSHFSAITDTDIRKAMNNLGVPNENEALSVDA
RQELDLRIGCAFTRYQTKYFQGKYGDLDSTLISYGPCQTPTLGFCVDRHDKIQSFKPEPY
WIIQVQVTCEGADRTLNLDWDRVRIFDKEVAQMFMGLIKASDTARVTDITKKEKTKSRPQ
ALNTVEMLRVASSGLGIGPQQTMQIAERLYTQGYISYPRTETTQYPENFDLVGTLKQQQN
HPDWGSAVRDLLNDGIQKPKKGNDVGDHPPITPMKSATESELGHDAFRLYDYITRHFIGT
ISPDCRYLQTVVSFEVGGEHFTFSGKQLIDPGYTALMTWQALSSDEKVPDLKREQQCPVN
DVKLSERLTSPPDYLTEAELITLMEKHGIGTDASIPVHINNICERNYVTIQAGRKLKPTT
LGVVLVHGYQKIDADLVLPTMRSAVEEQLNLIAHGKADYEAVLQHGISIFHLKFKYFVQN
IAGMDELFEVSFSPLAASGKPLSRCGKCRRFMKFIQAKPSRLHCSSCDETYNVPQNGNIK
LYKELKCPLDDFELVLWTTGAKGKTYPLCPYCFNNPPFKDMRKGQGCSECTHPTCQHSVA
HTGVSECVECENGILVLDVTSGPKWRMACNKCNVVINFFENAHKVSLSEDSCEDCGSNLM
EVDFSKGKTPLEDGKTEHTGCVFCDPILKNLVEKHHAKMRVRSAGGRGRGGRGRGRGGRG
RGRGRGKPKDKMAQLAAYFV
NT seq 2583 nt   +upstreamnt  +downstreamnt
atgcgcaccgttttaatggtggctgaaaagccatctttggcacagtcaattgccaaaatc
ctgtcaaatggaaatatgacatcaagaaaaggatcaaacggtgcatgctctgtgcacgaa
tacagagctaggtttgcacccatcaatgatactgctacgtttaaaatgacatctgtgtgt
ggacatgtatttggattggactttattggaaaatacaacaactgggataaagttgatccg
gttgaactttttcaagcacaaacccagaaaaaagaagcaacagaaaagttacacatgcct
tcctttcttcaaaaagaagcacgaggaatggattaccttgtactgtggctagattgtgac
aaagagggagaaaatatctgctttgaagtagtagactgtgttaaaggtgtgatgaacaga
aatgtgtcgggatgtactgtgttcagatcccacttcagtgcaattactgatacagatatt
aggaaggcgatgaacaaccttggtgtgccaaatgagaacgaggctttatcagtggatgcc
aggcaggagttagatcttaggataggatgtgcgtttacacgatatcagaccaaatacttt
caggggaagtatggtgacctggacagtacactgatatcatatggaccgtgtcagacacct
acattagggttctgtgtggacagacatgataagatacagtcatttaaacctgagccttac
tggatcatacaagtacaggtgacatgtgaaggagctgataggacgttaaacctagactgg
gatagagtgaggatatttgataaagaagttgctcagatgtttatgggacttattaaggct
tcagatactgcaagagtaacagatataacaaagaaagagaaaacaaagtcaagaccacaa
gctctgaatacagtggagatgttacgagttgccagttcaggattaggtattggtccccag
caaactatgcagatagctgagagattgtacacccagggttatatcagttatcctagaaca
gaaaccacacaatacccagagaactttgatcttgtgggaacattgaaacaacaacagaat
catccagactgggggagtgctgtcagagatttgctaaatgatggaatacagaaaccaaag
aaaggtaatgatgtcggggaccatcctcctattacaccaatgaagtcagctacagagagc
gagctgggacacgatgcctttagactgtatgattacatcactcgacattttattggcact
ataagtccagactgcagatacttgcagacagttgtttcatttgaagtgggtggagaacat
tttaccttcagtggtaaacagctgatagatcccggctacactgccctgatgacctggcag
gctctgtccagtgatgagaaagtaccggacttaaaacgggaacaacagtgtccagtcaat
gatgttaaattgtcagagagactaaccagtccaccggactacctgaccgaggcagagttg
atcaccctcatggagaagcatggaattggaactgatgccagtataccagtccacattaac
aatatctgtgagagaaattacgtaaccattcaggctgggagaaaattgaaacctacaact
cttggtgtggtactcgttcatggttaccagaagattgacgcagatctagtcttaccaaca
atgcgttcagcagtggaggaacaattgaacctgatcgcccacggcaaggccgactatgag
gcagtgctacaacatggcatcagcatatttcacctcaagttcaaatatttcgtacagaat
attgctggaatggatgaactgtttgaagtctccttctcaccccttgctgcatcaggcaaa
cctttgtcaagatgtggtaaatgtcgaagatttatgaagttcattcaggcgaagccaagt
cggctccattgttcttcatgtgacgagacgtataatgtaccacagaatggtaacattaaa
ttatacaaagaactaaagtgtcctctcgatgattttgaattggtgctttggactacagga
gctaagggaaagacctacccgctatgcccatactgcttcaacaacccaccgttcaaagac
atgagaaaaggtcaaggttgtagcgagtgtacacaccctacatgccagcactctgtggct
catacaggtgtgtcagagtgtgtagaatgtgagaatggaatactcgttctggatgtgaca
tcaggacctaaatggagaatggcgtgtaataagtgcaatgttgtcataaacttctttgag
aatgctcataaagtcagtttatcggaagattcttgtgaagattgtggatccaaccttatg
gaggttgattttagcaagggcaagacaccgttagaagatggaaaaacagagcatactggt
tgtgttttttgtgaccctattttgaaaaacttagttgagaaacaccatgccaaaatgaga
gtacggtctgctgggggaaggggtagaggagggcgtggtcgaggtaggggtgggcgtggc
agaggaagagggcgtggcaagccaaaagacaaaatggcacagcttgcagcttattttgta
tag

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