Ruditapes philippinarum (Manila clam): 132751000
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Entry
132751000 CDS
T09557
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 45-like
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
132751000
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rphi01002
]
132751000
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rphi04121
]
132751000
Enzymes [BR:
rphi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
132751000
Peptidases and inhibitors [BR:
rphi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
132751000
Ubiquitin system [BR:
rphi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
132751000
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
Motif
Other DBs
NCBI-GeneID:
132751000
NCBI-ProteinID:
XP_060597082
LinkDB
All DBs
Position
Unknown
AA seq
1090 aa
AA seq
DB search
MRVLEKEVVSTYSMGKKNKHKLRKSKENENSDSSEEVSGKGCMHVSKAINFSAMKKSLGK
QPFGECASCAKDVTKKEPKTLMDHLEGATSSDFVAEEEPTLWVCLQCGHQGCGRTSPEKH
ALKHFQTPRSSQHNIVINTSTWTAWCYDCDDELLPEKYKKVAECMEHIKKIACVPSTDTS
HGKNSNGGTSTGSDSVLNKGRPLSGKGAAAGCQKVKGLSNLGNTCFFNAVMQNLVQTYSL
ENLLGERKKGHPLRLQGDLFIDPESCSSSDECDEKNQKNTLKELPAIEVSINDPGPLTHA
LVVFLHDINTTSRSGCINPTALFGQVCKKAPRFKSMQQQDSHELLRYLMDNMKTEEIKRG
QSGILKYFKLSENTNPKKVDEEVRLKVKAYGHQIKHTFVECLFGGQLISTVVCEECKYIS
QILEPFLDLSLPVTEEKPQRPNQLHGARKKESGTDIKEETSVVKGVEGLAVKDEKMSKHQ
SKKMKKRQKRDARRSGKNKGSVDDGEKDEDDNDDKEEETEEKGDGETEKSTEQEEKYDAS
DADVEDNLESDTSRCYNKTLSDSIVGSLDETIVETPEDRPTISQEMDISAYRLDTTPCNT
SIEVDMKIENQSLSPDQSIENSSFIQASGLDNSKLTEPMGDVVTNGCDKEDVNVSYTLTN
GCLEENNVRSKSNEDTVDASFTFTCSTVTNGLCNGDINTESENPDIKLVNCKENIKKSEN
NSKTTQQTNGDIATEVNIGSKELDNDDVKSKSDKSVTDLTSSVSTLSIGDISSSLPSDLS
QMTLKDATEDDREDNKHKVESVDNKGLYINTDNSTNSAEQTIVNGEINNSMQYKYVVSLS
PTSKHHKLKEIQKEGQRKSVNTLAERYHPTSGECSLESCLNQFTAAELLTGNNKFGCKNC
TKLKYKNNPNKEKKETVYSNANKQYLIFQPPAVLTLHLKRFEQVGFSSRKVNRHVDFPFI
LDIAPYCSSLTQGIKRGQKKILYSLYGVVEHSGRLTSGHYTAYVKVRPNIGTLNNFLNKH
NVTLKEYLHTYAQHVVNGDRLEEDCSDGINLEGLVPPGRWYHISDSRVNEVTEASVERAQ
AYILFYERIY
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgagagttcttgagaaggaagtagtatcaacgtacagtatgggaaagaagaataagcac
aagcttaggaaaagcaaggaaaatgaaaattctgattcatcagaagaagtttcgggtaaa
ggatgtatgcatgttagtaaggctattaacttcagtgcaatgaagaaaagtcttggtaaa
caaccatttggagaatgtgctagctgtgctaaggatgtaactaagaaagagccaaagaca
ttgatggatcatttagaaggcgctacaagtagtgactttgtagcggaggaggagccaaca
ttgtgggtgtgtctacagtgtggtcaccaggggtgtggtagaactagcccagaaaaacac
gccctcaaacattttcagactcctagatcttcccaacataatatagttataaacacgtca
acatggacagcttggtgttacgattgtgatgatgagctgctacctgagaaatacaagaaa
gtagccgagtgtatggaacatataaaaaagattgcttgtgtgccttctacagatacatca
catggtaagaacagtaatggaggtacatctacaggatcagattctgttctcaacaaaggt
cgacctctgtccggaaaaggggcagcagctggctgccagaaggtcaagggattgagtaac
ctaggcaacacttgtttcttcaatgctgtgatgcagaatttggtacagacatacagtttg
gagaatttactgggagagagaaagaaaggtcatccactgaggttacaaggtgatctattt
atagacccagaatcttgtagttctagtgatgaatgcgacgagaaaaatcagaaaaataca
ttaaaagagttgcctgccatagaagtaagtataaatgacccaggtcctctcacacatgcc
ctggttgtatttctacatgacatcaacactacgtcaagatcaggatgtataaatcccaca
gctctgtttggacaagtctgcaaaaaggcaccaagatttaaaagtatgcagcaacaagat
agtcacgagttactacgatatctgatggataatatgaaaactgaggaaattaagagaggt
cagagtggtattctaaaatattttaaattgtctgaaaacacaaatcctaaaaaggtggat
gaggaagttcgactaaaagtaaaagcatacggacatcagataaagcatacgtttgtagaa
tgtttgtttggagggcagctgatcagcactgtagtctgtgaggaatgtaaatatatatct
cagattttagaacctttcctagatctttctctgccagtaactgaggaaaagccacagaga
ccaaaccagcttcatggtgctagaaagaaagaatctggtacagatataaaggaagagaca
agtgtagtgaaaggtgtggaaggtttggcagtgaaagatgaaaagatgtctaaacatcag
tccaaaaaaatgaagaaacgacagaaaagagatgctaggcgttcagggaagaataaaggt
agtgttgatgatggagagaaggatgaagatgataatgatgataaagaagaagaaacagaa
gaaaaaggtgatggagagactgagaaaagtacagaacaagaagaaaaatatgatgcttca
gatgctgatgttgaagataatttagaaagtgacacatcaagatgttacaataaaacattg
agtgacagtattgtaggaagtctggatgaaactattgtagaaactccagaagataggcca
accattagtcaggaaatggatatctctgcttatagactggataccactccatgtaacact
agtattgaagtagacatgaaaattgagaaccagtctctgtcacctgaccaatctattgaa
aatagttcttttatacaagcatcaggattggataattcaaaattgactgaaccaatgggt
gatgttgttacaaatggttgtgataaagaagatgtaaatgttagttatactttaacaaat
gggtgtctagaagaaaataatgttaggtcgaagtcgaatgaagatactgtagatgctagt
ttcacatttacatgcagcacagttacaaatggtttatgcaatggtgatattaacactgaa
agtgaaaaccccgatataaaactagtcaattgtaaagaaaacattaaaaaatctgaaaat
aactcaaaaactacacaacaaacaaatggtgatatagcaacggaagttaatataggtagt
aaagaattagacaatgatgatgtgaaaagtaaatcagataaatctgtgactgatttaaca
tcaagtgtaagtacattgagtataggagatatatccagtagtttacccagtgatttaagt
caaatgactctcaaagatgctacagaagatgatagagaagataataaacacaaagtagaa
agtgttgataataaaggtctatatataaacacagacaactctacgaatagtgctgagcag
accatagttaatggtgaaataaataacagtatgcagtataaatatgtagtgagtttatca
cccacatcaaaacaccataaactgaaggaaatccagaaagaagggcaaagaaaatctgtt
aatacacttgcagaaaggtatcatccaacgtctggggaatgttcccttgagtcgtgcctg
aatcaatttactgcagcagaactcctgactggaaacaacaagtttggatgtaaaaattgt
accaaacttaaatataaaaataacccaaacaaagagaaaaaagagacagtgtattcaaat
gccaacaagcaatatttgatcttccaacctccagcagtactgaccttacaccttaaacga
tttgaacaggttggatttagctcaaggaaagtcaatcgtcatgtagatttcccatttata
ctcgacatagcaccatattgtagctcccttacacaggggataaaaaggggtcagaagaag
atcttgtactccttatatggagtagtagaacacagtggccggcttacatctggtcattat
acggcctatgtcaaagtacgacctaacataggaacactcaacaatttcctaaacaaacat
aatgtgactttaaaagaatatttgcatacttacgcccagcatgtagtgaatggtgaccgg
ctggaggaagattgcagtgatggtataaatttagaagggctggttcccccaggacgctgg
taccacattagtgactcgcgtgtcaacgaagttacagaagcatctgtagaaagagctcag
gcctatattcttttctatgaaaggatttactaa
DBGET
integrated database retrieval system
