Ruditapes philippinarum (Manila clam): 132751263
Help
Entry
132751263 CDS
T09557
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 10-like isoform X1
KO
K11841
ubiquitin carboxyl-terminal hydrolase 10 [EC:
3.4.19.12
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rphi01002
]
132751263
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rphi04121
]
132751263
Enzymes [BR:
rphi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
132751263
Peptidases and inhibitors [BR:
rphi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
132751263
Ubiquitin system [BR:
rphi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
132751263
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
132751263
NCBI-ProteinID:
XP_060597403
LinkDB
All DBs
Position
Unknown
AA seq
944 aa
AA seq
DB search
MALSNEGFMFGRFDDLSPDEQYRIYKILHRQKGEPGSRVEFPWDKEEDEVSGAVGGKYKC
TTLQEKNLAVTGLEFGFQGDTNEGVQFSFMSGDSLMIQSGNFEGGMYNPVNVDQPVPTNA
DQFQGQFMVPGSGAYPEPGSNQFMSENMKPAMERIQYNEFSQFNNQMESADERSGLNSKL
QASMKPYERRNKKKRPPGYYKQSDSSVPQQNSNDFAPMQPDLTQPPPNFHPDMHYNMPPP
GLVPNQYTVNNQYSEVNRENVANFPAGIPVAYQGAPTPTGAGNMVVDNDNVKNNQRQEMG
DLYEVVIDSGAPQNSANIPARPETYQIQDHERTNSQSSVDNVNQSSSNVCEFIPNTNVAI
ENRMSQLNVQSSGVAKPTRVDVSIKDAQVIDEPSHMPLNTVQISQEKQVIDINTKEANDA
NDSKYSDNAAEFMDDSKMKSDSEIKDEPVVSTEPSVEPETSAVKNPEPVIQEPVKTAKPV
SWAGLFKSNNSNVTTPEAPMSYRSSGGDNSSVGADSEQRSEKELSPMPVPASEDSAAKEL
GEHLSKMVISHASVSLQPRGLVNRANWCYINGTLQALVACPPFYNLLKKLPRYPALSRGP
SSTPILDALVEFVHEFMPMSRNFEKGHKGVRDITPGQPFEPAYVYKMLQAIAVNPHFKLG
KQEDAEEFLSCILDGMHEEMSAAVNLNSNNIDGNGNETVESEDGYVNGYIHAEGEELEGE
PEDSWEQVGPKKKSVLTRRANFAKTPIADIFAGLVRSAVYKSSSKETATLEPFFTLQLDI
QSEKVWTVKDALEGLVSKEQISGYTCSKTNSEVEVMKKLSLEELPPVLILHLKCFVYNKD
GGSQKLMKKVDYGIELEITKDLLSPSARSKLTVNQRSYKLFAVVYHHGKKATGGHYTTNV
FHPGINGWVNSDDSQVKTVTALSVLKYSPPRVPYLLYYRRLDSH
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggctttatctaatgaggggtttatgttcgggagatttgatgatctgagcccggacgaa
cagtataggatctacaagatacttcatagacaaaaaggagagccaggaagtagagtagag
tttccatgggataaagaagaagatgaagtatcaggggcagttggaggtaaatataaatgt
acaaccctgcaagaaaagaacttggcagttactggtttagaatttggattccaaggtgac
acaaatgagggtgtgcaatttagttttatgtcaggggattccctgatgattcagtcagga
aactttgaaggaggcatgtataaccctgtcaatgtggatcaaccagttccaacaaatgca
gatcagtttcagggtcagtttatggttcctggcagtggagcctaccctgaacctggcagt
aatcaattcatgtccgaaaacatgaaaccagccatggaaaggatccagtataatgaattt
agccaatttaacaatcagatggaatcggctgatgagcgttctggacttaactctaagtta
caggcaagtatgaaaccatatgaaagaaggaataaaaagaagagacctccaggttattat
aaacagtctgattcctcagttccccaacaaaattccaatgactttgcccccatgcagccc
gatctcactcagccccctcccaattttcatccagatatgcattataatatgccacctcct
ggactcgttcccaatcagtatacagtaaataatcagtatagtgaagttaaccgggaaaat
gttgcaaactttcctgctggaataccagtggcataccaaggtgctcccacaccaactggt
gctggtaacatggtcgttgataatgataatgttaaaaataatcaaagacaagaaatgggg
gatctttatgaagttgtgattgattctggcgccccacagaatagtgcaaacattccagct
agacctgaaacatatcaaattcaagaccatgaacggactaactcccagagtagtgtagat
aatgttaatcaaagtagttcaaatgtttgcgagtttattccaaacacaaatgttgcaatt
gaaaatagaatgtcacaattaaacgtacaaagctctggcgttgccaagccaacgcgagtg
gatgtgtcaataaaagatgcccaagttattgatgaacctagtcatatgccattaaacact
gtgcaaataagtcaagaaaaacaagtaattgacatcaatactaaagaggcaaatgatgca
aatgattcaaaatattcggataacgctgctgagtttatggatgattcaaaaatgaaatca
gattcggaaattaaagatgaacctgttgttagtacagaaccatctgttgaaccagagacc
agcgcagtgaaaaatcctgagccagtgattcaggaacctgtgaaaacagcaaaacccgtg
tcttgggctggtttatttaaatcaaacaattcgaatgtgaccacacctgaagctcctatg
tcttatagaagttcaggtggggataactctagtgttggtgctgatagtgagcagagaagt
gaaaaggagttatctcccatgcctgtgccagccagcgaagatagtgcagcaaaagaacta
ggagagcatttatcaaagatggtcatcagtcacgcatcggtatcgttgcagcccagaggt
cttgttaaccgagcaaattggtgctatattaatggaacattacaagctctcgtagcatgc
cctccattctataatttactgaagaagttaccacggtacccagcactgtcacgaggtcct
tcctctacacctatacttgatgcattggttgagtttgtacacgagttcatgccaatgtca
agaaactttgaaaagggacataaaggtgtaagagatataacacctggacaaccatttgaa
cctgcatatgtctacaagatgcttcaagccatagctgtcaacccacactttaagctggga
aaacaagaagatgctgaggagtttttgagctgtatattagatggtatgcatgaagaaatg
tctgctgctgtcaacctgaactctaacaatattgacggtaatggaaatgaaactgtcgag
tccgaggatggttatgtgaatggttacattcatgctgaaggtgaagagcttgaaggggaa
ccagaggacagctgggaacaagttggacccaagaaaaaatccgttcttacaagaagggca
aactttgcaaagacccctatagcagatatatttgctggtttggttcggtcagctgtgtac
aagtcctcatcaaaggaaacggcaaccttagaacctttctttacattgcaattagatata
cagtctgaaaaggtatggactgtgaaggatgcccttgaaggccttgtcagtaaagaacaa
atcagtgggtacacatgttcgaaaacaaattcagaggtggaggtaatgaagaaattaagt
ttggaggaactgccacctgtacttattctacacctgaaatgttttgtctacaacaaagat
ggtggttcacagaaacttatgaagaaagtggactatggtattgaattagaaatcacaaaa
gatttactgtctcctagtgcacgcagcaaacttactgtaaatcaaagatcttacaaatta
tttgcagttgtctaccatcatgggaagaaagcaacaggtggacactacactacaaacgta
ttccatcccggaatcaacggatgggtgaacagcgacgacagtcaagtgaagacagtaacg
gcactctcggttctgaaatattcaccccctcgagtaccgtacttgctgtattacaggaga
ctggatagccactag
DBGET
integrated database retrieval system
