Ruditapes philippinarum (Manila clam): 132751395
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Entry
132751395 CDS
T09557
Name
(RefSeq) zinc finger BED domain-containing protein 4-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rphi03000
]
132751395
04121 Ubiquitin system [BR:
rphi04121
]
132751395
Transcription factors [BR:
rphi03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
132751395
Ubiquitin system [BR:
rphi04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
132751395
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZBED1_RNase-like
ZBED1_RNase-like_helical
zf-BED
FAM200-ZBED5_RNase-like
DUF659
DBD_Tnp_Hermes
zf-Di19
Spe-44
zf-C2H2_AHC1
Motif
Other DBs
NCBI-GeneID:
132751395
NCBI-ProteinID:
XP_060597545
LinkDB
All DBs
Position
Unknown
AA seq
342 aa
AA seq
DB search
MPPAKSNAWKYFKRCADSKTVKCTLCSCEMTYTGGTTNMLNHLRLKHPSENKISDTQKQH
SMDIFVNTKNKITETQSEKITQAIANMIVKDYIPLSIVESEGFLNLMQIVVPEYKVPSRN
TVKSRIEKRYDDERESLVKNLESVQSVSLTTDTWTSNATDSYMTITEHHLTDDWVMESNV
LMTREMQERHTGENLANKLKDCVSEFGLENKIGSIVHDNARNMQSASEKCEDWGDVGCFG
HTLQLCVKPALELPNVSKIVAKSRKLVGHFKHSTTLTAEMRNRQKVFKVPEHELIQDVPT
RWNSTHLMLERLCEQRRVITDIMLDDKFTKKSDSNLLLKDNE
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgccgcctgcaaaatctaatgcctggaaatatttcaaacgctgtgctgatagcaagact
gttaaatgtacattatgtagctgtgaaatgacgtatactggtggtactacaaacatgcta
aatcatttacgcttaaagcatccttctgaaaacaaaatctctgacacacaaaaacaacac
tcaatggacatatttgtgaacacgaaaaataaaataactgaaacgcaaagtgaaaaaatc
acgcaggctatagcaaacatgattgtaaaggactatatacctttaagtatagtagaaagt
gaaggatttcttaatctgatgcagatagtagtgccagagtacaaagtgccgagtagaaac
acagtaaaatcgcgtattgaaaagagatacgatgacgaaagagagtctcttgtcaaaaac
ctagaaagtgttcaatcagtttcgctcaccactgatacatggacatctaatgctactgac
agttacatgactattactgaacatcatcttactgatgactgggtgatggaatctaacgtg
ttgatgactcgcgaaatgcaagagagacacactggtgaaaatctcgcaaataaactgaag
gattgtgtatctgagttcggattagaaaacaaaattgggtcaattgtacatgataacgcg
agaaatatgcaaagtgctagtgaaaagtgcgaggattggggtgatgtaggctgctttgga
catacgcttcagttgtgcgtaaaacccgcacttgaattaccaaatgtaagcaaaatagtg
gctaaaagtagaaaactcgttggacactttaaacattccacgaccttaacagcagagatg
agaaatagacagaaagtgttcaaagtgcctgaacatgaacttattcaagatgtgccaacg
agatggaactcaacgcatctcatgttagagagactgtgtgaacaaagacgtgttatcacg
gatattatgttagacgataagttcactaagaaaagtgatagcaatttgttactcaaagat
aacgagtag
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integrated database retrieval system
