KEGG   Ruditapes philippinarum (Manila clam): 132751465
Entry
132751465         CDS       T09557                                 
Name
(RefSeq) flap endonuclease 1-like
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
rphi  Ruditapes philippinarum (Manila clam)
Pathway
rphi03030  DNA replication
rphi03410  Base excision repair
rphi03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    132751465
   03410 Base excision repair
    132751465
   03450 Non-homologous end-joining
    132751465
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rphi03032]
    132751465
   03400 DNA repair and recombination proteins [BR:rphi03400]
    132751465
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rphi04147]
    132751465
DNA replication proteins [BR:rphi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    132751465
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     132751465
DNA repair and recombination proteins [BR:rphi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     132751465
Exosome [BR:rphi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   132751465
SSDB
Motif
Pfam: XPG_N XPG_I 5_3_exonuc 5_3_exonuc_N HHH_5 FAM91_N HHH_2 EMC3_TMCO1
Other DBs
NCBI-GeneID: 132751465
NCBI-ProteinID: XP_060597602
LinkDB
Position
Unknown
AA seq 377 aa
MGIKGLSQLLADHAPGCMKENEIKNYFGRKVAVDASMCIYQFLIAVRQDGSQLTNEDGET
TSHLMGMFYRTIRMVENGIKPVYVFDGKPPEMKSGELEKRKERRDEAQKALEKAEEAGDA
ENIEKFNRRLVKVTKQHNEECKELLKLMGIPYVDAPCEAEAQCAALVKAGKVWATGTEDM
DSLTFGSDVVLRHLTFSEARKMPIKEYHYDRILQGLELSNDEFIDLCILLGCDYCESIRG
IGPKRAIDLIKQYKSIDEIMKNIDLKKYTIPENWMYKEARELFKNPEVATAEEVELKWSE
PKEEELIDYMVNKKGFNEDRIRNGLKKLSKARTGSTQGRLDGFFKVLSTTSTTPKRKAED
SKGSAKKKAKGGFKRPK
NT seq 1134 nt   +upstreamnt  +downstreamnt
atgggaataaaaggcttgtcacaactcctggccgaccatgcccccggatgtatgaaagaa
aatgagattaaaaactattttggcagaaaagtggcagtagatgcttctatgtgtatttac
cagtttcttattgccgtaagacaagatggcagccagctcacaaatgaagatggagaaacc
acaagtcatttaatgggaatgttttatcgtacaattcgtatggtagagaatggtatcaaa
cctgtgtatgtatttgatggtaaaccaccagaaatgaagtctggtgagcttgaaaagaga
aaggaaagacgtgatgaggcacagaaagctttagagaaggctgaagaagcaggtgatgct
gagaatattgagaaatttaacagaagacttgtgaaggtaacaaaacaacataatgaagag
tgtaaggaactcctcaagttgatgggcatcccctatgtagatgctccctgtgaggctgaa
gctcaatgtgctgctctggtaaaggctggcaaggtgtgggcaacaggtacagaggatatg
gactccctgacttttggttctgatgttgtcctaagacatctcacattcagtgaagcaagg
aagatgccaataaaggagtatcactatgatagaatcttacagggtttggaattgtctaac
gacgagtttatagatctgtgtatattgctgggctgtgattactgtgagtctatacgtgga
attggaccaaagcgagctatagatctgattaaacaatataaatctattgatgaaataatg
aaaaatatagatctgaagaaatacacaatacctgagaattggatgtacaaagaagctcgt
gaactattcaaaaatccagaagttgctacagccgaggaagtagagctgaagtggtcagag
ccaaaagaagaagaacttatagattacatggtcaataagaaaggattcaatgaggacaga
atacgtaatgggttaaagaaactgtctaaagcccgtactggcagtacacaaggaagactt
gacgggttctttaaagtactttcaacgacatcaacaactcctaaacgaaaggcagaggat
tccaaaggttcagccaagaagaaggctaagggaggcttcaaaaggccaaaatga

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