Ruditapes philippinarum (Manila clam): 132751670
Help
Entry
132751670 CDS
T09557
Name
(RefSeq) E3 ubiquitin-protein ligase HECW2-like isoform X1
KO
K12168
E3 ubiquitin-protein ligase HECW2 [EC:
2.3.2.26
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rphi04121
]
132751670
Enzymes [BR:
rphi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
132751670
Ubiquitin system [BR:
rphi04121
]
Ubiquitin ligases (E3)
HECT type E3
132751670
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
HECW_N
HECW1_helix
WW
C2
SKICH
Motif
Other DBs
NCBI-GeneID:
132751670
NCBI-ProteinID:
XP_060597866
LinkDB
All DBs
Position
Unknown
AA seq
2058 aa
AA seq
DB search
MNDHEGIVRRSSSKSAQSVTADDLSLPSPRTPLFDDDQTFELPERSSSDSNLAALADDAE
STLNVCGRQFAIGSGAKIKVSWKVREECGSDDWIGLFPIGESNKSKFWDSKTRGANGGQK
GELLWDLDVVSHYFTDEKTKVCFKYFNGSTGDLIATSPAIVINNPLANTLLHENGACGDN
KLKDSPTNTKFVHLEFSDLESVNLKKGIFFNPDPYLKLCIQPGKLCHHQDHHVHELRTSI
AENTTCPTWGTEVLDMDVLPSDIIEFEIKDKFAKSRPTLSRFLGKATVAVQRILDKAAGN
DGPVSLSLDLSRRNPAESVSGAMKFSVRVTKSPLKPSGKPVPAKRKRPNDLRQSSLPESS
DFGETFHYANKERCFTDTAISSLNGILGKDSSESPDSENAATLFHESELRISDDFDNSQE
DEFLSPSFTSVPNTFGNNSAVDVVSGFENGCDHREVNNIEGLIPATSADVTIQSDNEIGA
VGGSGANVTTCGFLSSLKNVSGTRSDDSALPSSADNSDGSNAMGLEIVINKCSTLTDKRD
LSDSLEILPSCIGPTIDSSKSRRNFANLDFSSNLNLLDDNLSHGFASKKERPKLAEGITL
NLPDVEDDVSQMPPDLPPRTYKAPPLPPRHRSNEAPPLPPRNTDKHSSAQSTTHSVTTPT
SPARSVESLDFVNLAPLEPPPLPPRTYSPVHMAGADRGDRGTDSGSGGSMSLLSTEDSDS
RSFDSMEAFSGSHESLQTDSAERERRSSGLGQDVIKREHKKLHRLSQGRNMNSLSGGLIS
SQTGVLGADSLETQRPVTPPTREWRRSAEIMSLNRDDSNKTPPPIVHRHKPVDSLFDSSL
TEGSHSENFDSPVERLRSLNFAPVSEGSCTPPTLERLRSRDQEDTPPPVERHKPIETSQF
SDERHKLLDSQNAHRPLNLSHSVGRHRHVDPQSSIMDRSRTFDRQRSVDSIPVDRLRNLD
PLSNTQFDFDMPPSLPPFLNRQSSEVPQTDTVVTSDYSGQLVNSEGQNIYSPVLELQPPV
YCRQRSRDTPRVTDRQLSTDSAGSSVFDSQSTKLPVRRSLSPAVRRVVDSSIAEPQGAAG
GSPALPVRTYPGIDLSSGRPETPPRPGAIGTGREGTPSPPIIHPRNRVLSDEEKQQNRQN
IHQHLQMWTQKKKERANSSFGSEAGDIDIASPTSETQSLTNGTCGWERFDDPGVTMDTSQ
AEVPLHVSGAEGGTPVGQSAMAVSRLSPTPASSTVWQLRNLGENDPPPSIDSIDSAGPPS
SPLPKLPARRRYHRVEPNPGDVPLPPGGYKEDSESTYGWEARVDSHHRVFYIDHVNRTTT
WEKPQSGQRSIHRRPTISSQQRQQMDRRYQSIRRTIRQRQEPEPASNSAESTSSGTSDGS
PQTSAQTVIAAPVTMMATSENRGTYRQPAVKFLMRPDFFPLLQANENGMMEYNRNQTLKH
MINKIRKDPANFERYQHNRDLVAFLNLFADMTKELPEGWEMKFDKTNSKPFFIDHHLKGT
TFIDPRLPADVPPVNPDFLHTSLIRVRHRSGGQEHSPTRSEAPTPPPRQPITDHSAVPTA
YNDKVVLFLRQPNIQELLKEKYPLYATSSPLKDKVHKIATGGTEALDKMSNDLPLTIMLS
VFENDIMSFIPPHLLGMTRSSSPMETSVTDSPHTSPNTMVTDTARSNVRVPAPYKRDFHA
KLRNFYRKLEQKGHGQGPGKLKMMVRRDHVLEDSFNKIMSTPKKELQKSKLYITFTGEEG
LDYGGPSREFFFLLSRELFNPYYGLFEYSANDTYTVQVSPMSAFVENCHEWFRFAGRVLG
LALIHQYLLDAFFTRPFYKFLLRVPCCLADVEAYDAEFHQSLTWVKENDISELDMDLFFS
VNEEVFGQVTERELKQNGKNIPVTEKNKKEYIERMVKWRLERGVTEQMESIIKGFHEVLD
PRIVSVFDARELELVIAGTVEIDINDWRKNTEYRSGYHNLNQVIIWFWEAIEKFDNERRL
RLLQFVTGTSSIPYEGFAALRGSNGPRKFCIEKWGKVTSLPRAHTCFNRLDLPPYTTFEM
LFEKLVTAVEETSTFGIE
NT seq
6177 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaccatgaaggaatagttagaagatctagttcaaaatcagctcagtcagtgacg
gcagacgacctgtctttaccgtcgccacggacaccactttttgatgacgatcaaacgttt
gagttaccggagagaagtagtagtgactcgaacctagcagctcttgctgatgatgctgaa
tccactcttaatgtatgtggccgccagttcgccattggtagcggggcaaagatcaaggtc
agctggaaggtgcgagaggaatgcgggtcagatgactggattggtctatttccaataggt
gaatcaaacaaatccaagttctgggatagtaaaacacgtggtgctaatggtgggcagaaa
ggggaactactctgggaccttgatgttgtcagccattactttactgacgagaaaacaaag
gtgtgtttcaaatattttaatggcagtactggtgacctaatagctaccagcccagcaata
gtaatcaacaatccactggccaatacacttctacatgagaatggtgcctgtggtgataac
aaactaaaagactctccaaccaatacaaaatttgttcatttggaattttcagatttggaa
tccgtgaatttaaagaaagggatatttttcaacccggacccgtatttgaagttgtgtata
cagcctggtaaactgtgtcatcaccaggaccatcatgtacatgagctgcgaacctccata
gccgaaaatacaacatgtcccacctggggcactgaggtacttgatatggatgtgttgccc
tcggatattatagagtttgaaattaaagacaaatttgctaaaagtcgaccaacattaagt
cgttttcttggtaaagccacagtggcggtacagagaatcctggataaagcagcgggaaat
gacgggcctgtttccctgtcactggacttaagtcggagaaatccagctgagagtgttagt
ggagccatgaaattctccgttagagtcacaaaatctccacttaaaccatctgggaagcca
gtgccagcgaagaggaaacggcccaatgatttacgtcaatcatccctgccagagtcgtcc
gactttggagagacatttcactatgcaaacaaggaacgttgtttcactgatactgcaatt
agcagtttaaatggcattttagggaaggactcgagtgagtcaccagattcagaaaatgct
gcaacactgtttcatgaaagtgaattacgaatatccgatgattttgacaactcccaagag
gacgagtttctctcaccaagttttacatcagtgccaaatacatttggaaataatagtgct
gtagatgtagtgtctggatttgaaaatggctgtgatcatagggaagtgaataatatagag
ggattaattcccgcgacatctgctgacgttaccattcagtcagacaatgaaataggggct
gttggaggctcaggtgcaaatgtaacaacatgtggatttttaagtagtttaaagaatgtg
tcgggaacacggagtgatgatagtgctctgccttcaagtgcagataactctgacggctca
aacgcaatgggcttagaaattgtgataaataaatgttcaacattaacagataaacgtgat
ctctctgactcattagagattttgccgtcatgtatagggcctacaattgatagttcaaaa
tctagaaggaattttgctaatcttgatttttcttcaaatttgaatttattggatgacaac
ctttctcacggttttgcttcaaagaaagaaaggcctaaattagcagaaggaataacgctt
aatttacctgatgtagaagatgatgttagtcagatgccccctgatttaccccctcgtaca
tacaaagctccgcccttacctccccgacatcgttcaaatgaggctccgcctcttccacct
aggaacactgacaaacattcatctgcacagtctacaacacatagtgtcactacaccaaca
agtccagcaagatctgttgaaagtttagactttgttaatttagctccccttgagccccct
cctttacccccaagaacatacagtcctgttcatatggcaggggcggatcgaggggaccga
gggacggattctggaagtggcggctcgatgtcgctgttgtcaacagaggacagtgatagc
cggagttttgatagtatggaggcattttccggttcacatgaaagcttacagactgattca
gcggaaagggagcggcgatctagtggcttaggtcaagatgtgattaagcgcgaacataaa
aaattacatagactttcccaagggcggaatatgaatagtctttcaggggggttaatttca
tctcaaactggtgttttaggtgcggattctttagaaacacaaaggcctgttactccacct
acaagagagtggcgaagatctgctgaaataatgtcgctaaatcgtgatgatagtaacaaa
acaccaccaccaattgttcatagacataaacctgttgatagcctatttgactcgtcatta
acggaaggcagtcacagtgaaaactttgactctccagtggagagattaagatctttaaat
tttgcaccagtaagtgagggcagttgtaccccaccgaccttagagaggttacgtagtaga
gatcaggaggacacgcctcctccggtagagagacataaacctatagaaacctcacagttt
tccgatgaaagacataaattattagattctcaaaatgcacatagaccattgaatttatcg
cattctgttggtagacatagacatgtagacccacagtcctctataatggatcgtagtaga
acatttgacaggcagcggtctgtagatagtatacctgttgatagattaagaaatttagat
ccattatcaaatactcagtttgattttgacatgcccccttctttaccaccatttttaaac
cgacaatcaagtgaagttcctcagactgacactgtagtgacttcggattattctgggcaa
cttgtgaacagtgaaggtcagaatatttacagcccagtgctagagcttcaacctcctgta
tactgtagacagcgatcaagggatactccacgagtcactgataggcaactatctactgat
agtgcaggaagtagtgtttttgatagtcagagtacaaaacttcccgtacggcggtcgtta
agtcctgctgttcgacgtgtagttgactcatctattgctgagccccagggtgcagctggc
ggatcacctgcacttcctgtcagaacatatccaggaattgatttatcatccgggcgccca
gagacgccaccccgccctggagctataggcactggtcgggaaggtactccttccccgcca
attattcatccaagaaaccgagtgcttagtgatgaggaaaaacaacaaaatagacagaat
atacatcagcatttacaaatgtggactcagaaaaagaaagaacgtgcaaattccagtttt
ggtagcgaagctggtgatattgatatagcgtcaccgacatcggaaacacagagtttaaca
aatggcacctgtggctgggagagatttgatgatccaggcgtaaccatggatacttcacag
gcggaggtaccgttacatgtgtctggggcagagggagggacaccagtggggcaaagtgca
atggccgtcagtagactgtcaccgactccagcaagttctactgtctggcaactgagaaat
ctaggtgaaaatgatccaccacctagtattgattcaattgatagtgctgggccaccctct
tcaccgttacccaagttgccggctcgacgaaggtatcatagggtggagccaaatccgggc
gatgtgcccctcccaccaggtgggtataaggaagattctgagtcaacttatggttgggaa
gccagggttgactcgcatcatcgggtgttttatatcgaccatgttaatcgtacaacaacc
tgggaaaaacctcaaagtggacaacgttctatacatcggcgaccaacaattagttctcag
caacgtcagcaaatggaccgacggtaccagagtatacgccgcactatacgacagcgacaa
gaaccagaacctgccagtaactcggctgaaagcacttcatcaggtacaagtgatggaagt
ccgcagacctcggcacagactgtgatagcagcaccagtaacgatgatggccacatcagag
aatcggggaacgtaccgtcaaccggcagtcaaatttctcatgcgaccagatttcttccca
cttctccaggcaaatgaaaatggaatgatggaatataacaggaaccagaccctcaaacac
atgatcaacaaaatacgcaaagatccggctaattttgaaaggtatcagcataatcgtgat
ctggtagcgttcctcaatttgtttgctgatatgaccaaagaattacctgaaggctgggag
atgaagtttgataaaaccaactctaaaccatttttcatagatcatcatttgaagggtaca
acatttatagatcctcgacttccagcagatgttccgccagtaaatccagactttctacac
acatcattgatacgtgtacgacataggtcaggtggccaggaacactcacctacacgcagt
gaagctcctacaccacctccccgtcaaccaataacagatcacagtgctgttccaacagcg
tacaatgataaagttgtgttatttctacggcaaccaaacattcaggagttgttgaaggag
aaatacccgctgtatgccacatctagtccactgaaagataaagtacacaagatagctaca
ggagggaccgaggccctagataaaatgtctaatgatcttccattaaccataatgctgagt
gtatttgagaatgatataatgtcatttataccaccacacctgttgggaatgacaagatct
tcatctcccatggaaacatctgtcacagactcccctcatacctcacctaatactatggta
acagatacagcaaggtctaatgtgcgagtccccgctccatacaagagagatttccatgcc
aaacttagaaatttctaccgcaaactagagcaaaaaggtcatggacagggacctggcaaa
ttaaaaatgatggttagaagagatcatgtcttagaggattccttcaacaaaatcatgtcc
accccgaagaaagagttacagaagagtaaactgtacatcacgtttactggtgaggagggt
ctagattacggaggaccttcacgagaatttttcttcctgttgtcacgggaattgtttaat
ccgtactacgggttgtttgagtactctgctaatgacacgtacacagtgcaagtcagtcca
atgtcagcgttcgtagagaattgtcatgaatggttccgttttgctggtcgagtgttggga
cttgcattaatacatcaatatctcttggacgctttcttcacacgacctttctacaagttc
ttactgcgagtgccatgttgtttagctgatgtggaggcatatgatgccgagtttcaccag
agtttgacctgggtcaaggaaaacgatatatccgaactagatatggatcttttcttctct
gtaaatgaagaagtattcggacaggtaacagaacgtgagctgaaacagaatgggaagaat
attcctgtgacagagaagaataagaaagagtatatagagagaatggtgaagtggcgacta
gaacgtggcgttactgaacagatggagagtatcataaaaggtttccacgaggtgctcgat
ccgcgtattgtctcggtgtttgatgcccgagaacttgagcttgttattgctggaactgtg
gaaatagatatcaatgattggaggaaaaatacagaatatagatctggttatcataattta
aatcaagtgattatttggttttgggaggccatagagaagtttgataatgaacgtagacta
cgtttattgcagtttgtaactgggacttctagtataccatatgaaggatttgctgccctc
agaggaagtaatggtccacggaaattctgtatagagaagtggggaaaagtaaccagtcta
ccaagagctcacacctgttttaaccggcttgacctgcccccatatacaacatttgaaatg
ctgtttgagaagctagtcactgctgtagaagaaacgagcacatttggtattgaatga
DBGET
integrated database retrieval system
