Ruditapes philippinarum (Manila clam): 132751823
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Entry
132751823 CDS
T09557
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rphi03000
]
132751823
04121 Ubiquitin system [BR:
rphi04121
]
132751823
Transcription factors [BR:
rphi03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
132751823
Ubiquitin system [BR:
rphi04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
132751823
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF659
Motif
Other DBs
NCBI-GeneID:
132751823
NCBI-ProteinID:
XP_060598027
LinkDB
All DBs
Position
Unknown
AA seq
459 aa
AA seq
DB search
MNRKKKLDDLTLKLLVGKVLPLSLVSNRHFQTLIKELNPSYDLPSKHDINKALLKKEVDM
VEKLKKDLPSISKGGFVAITHDGWTSCATQSYDTITVHFINANWELRSAVLQTRKVEGSH
TAENIAAKLKEAVIHWNLPPPIVVTDNAANEVKAVQILGWERFGCYGHRINLIVKHSLQV
PEVARIVGKTRKLVGVFHQSTSVNDCLLEKQRTIYQNNVSIIGHKLIQDVPTRWNSCYDM
LERVVEQSAAIFAVASDDKLSQTASNNVKTYCLTFDEHSTVEGLLQLLLPFKKATSILCA
ENAPTISKVLLCMAKINDIINSKTFSPTIMKVVTVMKQQLQKRTDLEDISVMGAMLNPDL
KSGSFLSDEQKHQAHKLLLDKCISLFGSHGTVPGGFVKTENDDASETQTATSSSVLPELP
SLPELPSLPELPSLPEPNVDENHNFSSPEPPTKKIKCSD
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaaaaaaaaagttggatgaccttactttaaaacttctagtcggaaaagtcctg
ccattgagtttagtcagtaaccgccactttcaaaccttgataaaggagttgaatccaagt
tatgatttgccatcaaaacacgacatcaacaaagctttgctaaaaaaggaggtagacatg
gttgaaaaactaaaaaaagacttgccatccatttctaaagggggttttgtagcaataaca
cacgacggatggacaagctgtgccacccagagttatgatacaattacagttcactttatt
aatgccaactgggaactgcgaagtgctgttcttcaaacacgtaaggtagagggttcccac
acagctgagaacattgctgctaaacttaaagaagctgttatccactggaatctcccacct
cctattgttgtaacagacaatgcggcaaatgaagtcaaagctgtgcagattcttggttgg
gagcgatttggttgctatggtcaccgcattaatctaatagtaaaacattcccttcaagtt
cctgaagttgctaggatagtcggtaaaacaagaaaactagttggtgtgtttcatcagtct
acaagtgttaacgattgtttgcttgaaaaacagagaacaatatatcagaacaatgtatca
attattggacacaaacttattcaagatgttcctacgcgctggaatagctgttatgatatg
ttggaaagggttgttgaacagagtgcagctatttttgctgtcgcgagtgatgacaaatta
agccagacagcttctaataatgtaaaaacttactgtttgacttttgatgaacatagcact
gtagagggattattacagttgctattaccgtttaaaaaagcaacatctatcctctgtgct
gaaaatgctccgaccataagtaaggtattgttgtgcatggcaaaaattaatgacatcata
aactcaaaaactttttcacctacaattatgaaagttgttactgtaatgaaacaacaacta
cagaaaaggactgatctcgaggacatttctgttatgggggccatgcttaaccctgaccta
aaatcaggttcctttttgtctgatgaacaaaagcaccaagcacataagttgcttttagac
aaatgtatttcattgtttggctcacatgggactgtccctggtggttttgtaaaaacagaa
aatgatgatgctagtgaaacacaaacagcaacaagctcctctgtccttcctgaacttcct
agcctacctgaacttcctagcctacctgaacttcctagcctacctgaaccaaatgttgat
gagaatcacaacttttcttctcctgaacccccaactaagaaaataaagtgctctgactaa
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