Ruditapes philippinarum (Manila clam): 132751943
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Entry
132751943 CDS
T09557
Name
(RefSeq) general transcription factor 3C polypeptide 3-like
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rphi03021
]
132751943
Transcription machinery [BR:
rphi03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
132751943
TFIIIC, fungi type
132751943
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DDE_1
HTH_Tnp_Tc5
TPR_8
TPR_2
TPR_14
TPR_1
TPR_12
TPR_16
ANAPC3
TPR_19
TPR_9
TPR_CcmH_CycH
CENP-B_N
HAT_PRP39_C
HTH_23
HTH_38
EST1_DNA_bind
HTH_50
HTH_Tnp_ISL3
Trp_repressor
Motif
Other DBs
NCBI-GeneID:
132751943
NCBI-ProteinID:
XP_060598148
LinkDB
All DBs
Position
Unknown
AA seq
1311 aa
AA seq
DB search
MSKRKVLTLDERVRVLELSKNKSARKIADELGVGKTQIQNILKRKAEVLEDVENNVSGHR
KRPRHTTGNEDINDLVFKWFTDVTARRMPVSGPLLQAQALRFAQELGVETFKASTGWLAS
FLKRNNIVLGTMSGERGDVDNDVVNDWKSKLPNICAGYHPKDIFNMDETGLFYRDTTRKS
YHLKGDELAGGKRSKERITVALCASMSGEKLKPLVIGKSAKPRCFSRIKPERLPVTYRNN
KKAWMTSELMIDWLKSVDRQMKRSGRHILMFLDNAPAHPKVTLDNIKLVFLPANTTSVAQ
PMDQGIIQTLKLKYRSRQLKYILSQMEHSDKVGSTILREISILDAIYWINGSWKEVEAST
IQKCFAKCGFTQFNVQVDNIDCDDKSDNDDDDDEVPLAVLRLSNELFGCTFSDLVDIDKA
VPTFDLNTVNWDRNARDMIKEIRDSNNDDDDDDDDNDDIQETGAIISMSDANEMLYKLKE
LALSKGQDKWLESIMTLQDSFVSCRAEVDTKQSKISDFFKFMCPVNIQGGFLSKINVGLA
QIIIHYKEQKQPYKRRPGKKRKKKWDLPSHLENMMGEVNMIFAQGKHEEAINQCLEIIRL
APNANKPFQTLGMIYEDMGDMQKALQYSLIAAYLAPYDSEEWAKLAEMCLEQNDIGQATK
CYTQAINANGENKIDCIWERARLYETLKEHKKALDGYLMLLPLLPKSDSERYLKLAWGIT
RSFYEQGEKKRAIDTMMKAFTDHPDHITSEDVNLLLEILIQEKKYLESLKIFVEHCGVSF
TFPGEKKWSNTHNLPIKEVKESIPTRCSVPDMLPIDLRIKLAVCMIHSEYIKIVQVVIEP
LFEEDIEVMGDLYLDTAEAYMDKGYYKQAQPLLEMLVKSQNYHLAAVWLRYGECLNNVGD
LHGSCEAYTRVVELAPSHIGARMSLSAIQQQMGKHDEALELLQHDDGEQRKMSKEACILF
LLLEQQMLLQKCHLLHAQGKLDEFLETAKQLLFHEWREIEAENMSYLQAIRTYKHRKDSL
KSHFQFKGKDTKLVSGLTSVKKTSLAISFADLWDVFLLLGKSLLEKGRFTEFEDVTLLGM
LCPLFNQDENLLADFEWFILNAAIISGNQLRSYAFGRQIVLDNLESPQAWNMFMQVIMVC
NDQRHNRFCLRKSMTEPNNIILGIMNGHNSMASGTYKHSLGEYANVFRRTPTDPMLSLCI
GLDFIHCASQRFAAKRQYLITQGLAFLNNYIELRGECQETYYNMARALHQINILYAAVHY
YKKALEYPPCVGDRRGMFDLTMEIAYNMALIYQNSGAIDYAKYLLYKYCVI
NT seq
3936 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaacgtaaagtgctgactttggacgaacgcgtccgtgtattggaactgtcaaaa
aataaaagtgctcgaaaaatagccgatgaactaggtgttgggaaaacacaaatacaaaac
attctgaaaagaaaggcggaagtattggaggatgtggaaaataacgtttctgggcaccga
aaacgtccgagacacacaactggaaatgaggacataaatgaccttgtgttcaaatggttt
acagatgtaaccgccagaagaatgcctgtgtctggtccgcttctgcaggcacaagctcta
agatttgctcaagagttgggtgttgaaacattcaaagcatcaactgggtggttagcgtct
ttccttaagagaaataatattgtgttagggactatgtctggtgaaaggggagatgttgac
aatgatgttgtgaatgactggaagtcaaagctaccaaatatctgtgctggataccatcca
aaagacatattcaacatggacgaaacagggttattctacagagatacaaccaggaagtcc
taccatttgaaaggagatgagctagccggtgggaagcgctctaaagagagaataacggta
gcattgtgtgcttccatgtctggtgaaaagcttaagcctctagtgataggcaagtccgcc
aaaccgagatgtttcagcaggataaaaccagaaagactcccagttacatatagaaacaat
aagaaggcatggatgacttccgagctcatgatagactggctaaaatcggttgatcgtcag
atgaaaaggtcaggtcgtcacattctcatgttcttggataatgctccagctcatcccaag
gtgactttagacaatatcaagttagtatttcttcctgctaatactacgtctgttgctcag
cccatggaccaagggattattcaaaccctcaaactgaaataccgtagtcgtcagcttaaa
tacattctaagtcaaatggaacatagtgataaagtaggttccacaattcttagggagata
tcaattcttgacgcaatctactggataaacgggtcgtggaaagaagttgaagcttctact
attcagaagtgtttcgcaaaatgtggtttcactcaattcaatgtgcaggtagataatatt
gactgtgatgataaaagtgataatgatgatgatgatgatgaggtgccacttgcagttcta
agactgagcaatgagttgtttggatgtacatttagtgacttagtggacattgataaagca
gttccaacatttgacttaaacactgttaactgggataggaatgcacgggatatgataaaa
gaaatcagagacagtaataatgatgatgatgatgatgatgatgacaatgatgatattcaa
gagacaggtgctattattagtatgagtgatgcaaatgagatgttgtataaattgaaagaa
ttagcattgagcaaaggtcaagacaaatggctcgaaagcataatgactttacaggacagt
tttgtgagttgtagagctgaggttgatacaaagcaatcaaagattagtgactttttcaag
ttcatgtgtcctgttaacatacaaggaggatttcttagcaagataaatgtcggacttgca
caaataataatacattataaagaacaaaagcaaccttataagagacgaccaggaaagaag
cggaaaaagaaatgggatctacctagtcatttagagaatatgatgggtgaagtgaatatg
atatttgctcaaggaaaacatgaggaagctatcaaccagtgtctagaaattatcagactt
gctccaaatgcaaacaagccatttcagacattaggaatgatatacgaagatatgggagat
atgcagaaagcattacagtattcattgatagcagcatatctagctccgtatgatagtgag
gaatgggcaaaactggcagaaatgtgtcttgaacagaatgatattggccaggcaacgaag
tgttatactcaggcaatcaatgcaaatggagagaacaagattgactgtatctgggagaga
gccaggttgtacgagacgttgaaagaacacaagaaagctcttgatggatatctgatgttg
ctgcctttattaccaaaatctgactccgagaggtacctgaagttagcatggggcatcacc
aggagtttttatgagcaaggagagaaaaagcgtgcaatagatacaatgatgaaggcattt
acagaccatccagatcatataacatctgaagatgtgaatttattgttggagattttgata
caagaaaagaagtatctggaaagtctaaagatatttgtagagcattgcggtgtcagtttc
acatttccaggagagaaaaaatggtcaaatacacacaacttgcctataaaagaggtcaag
gaaagtataccaacaagatgttctgtaccagatatgttaccaatagaccttagaatcaag
ttggctgtttgtatgatacattcagaatacatcaaaattgtgcaggtggtgatagaacca
ttgtttgaggaagatatcgaggttatgggagatttgtacctggatacagccgaggcctac
atggataaaggttattataaacaagcacaaccattactggaaatgttggttaagtcacaa
aactaccatcttgctgctgtgtggttacggtatggtgaatgtttgaacaatgtaggagat
ttgcatgggtcatgtgaggcttacacgagggtggtagagttagctccctcacatatcggg
gctagaatgtccttgtcagccattcaacaacagatgggcaaacatgacgaggcattagaa
cttttacaacatgatgatggagaacagagaaaaatgagcaaagaggcatgtatattattt
ctacttttagaacagcagatgttactacagaaatgtcatcttcttcatgctcagggaaaa
ctggatgaattcctcgagacagcaaaacaattattgtttcatgagtggagggagatagag
gcagaaaacatgagttatttacaagccatacggacatacaagcacagaaaagatagcttg
aaaagtcatttccagtttaagggaaaagatactaaacttgtttcagggttgacgtcagtg
aagaagacgtcacttgctatctcgtttgctgatttgtgggatgtctttttactgttaggt
aaatcactactagagaaagggagatttacagagtttgaagatgttacgttactcggtatg
ctgtgtccgctattcaatcaagatgaaaatttgttagctgattttgagtggtttatacta
aacgctgctataatatcgggaaaccaactacgttcctatgcttttggtagacaaatagtt
ctagataatttggagtcgcctcaagcgtggaacatgtttatgcaggtgataatggtgtgc
aatgatcagagacataacaggttctgtctacgaaaaagtatgactgagccaaacaacata
attttgggcatcatgaacgggcacaactcaatggcttctggaacatacaaacattcacta
ggtgaatatgccaatgtgtttagaagaactcctacagatccaatgcttagtctctgtatt
ggattagatttcatacattgtgcatcacagagatttgctgctaaacgacagtatcttatt
acacagggtttggcatttttgaacaattacatcgagcttcgtggagaatgccaggaaaca
tactacaatatggcaagagccctgcatcaaataaacatcttgtatgccgcagttcattac
tacaagaaagccttggaatatccaccatgtgttggagataggaggggaatgtttgacttg
acgatggagatagcctacaacatggccttgatctaccaaaacagtggagccattgattat
gccaaatacttactgtacaagtactgtgtcatctga
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