Ruditapes philippinarum (Manila clam): 132752114
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Entry
132752114 CDS
T09557
Name
(RefSeq) cleavage stimulation factor subunit 2-like
KO
K14407
cleavage stimulation factor subunit 2
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132752114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rphi03019
]
132752114
Messenger RNA biogenesis [BR:
rphi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
132752114
U7-dependent histone pre-mRNA processing factors
132752114
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
RRM_10
RRM_7
RRM_Rrp7
Motif
Other DBs
NCBI-GeneID:
132752114
NCBI-ProteinID:
XP_060598377
LinkDB
All DBs
Position
Unknown
AA seq
379 aa
AA seq
DB search
MMDDLAPISAQERAKRSVFVGNIPYEATEEALKEIFIQAGPVVSFRLVYDRETGKPKGYG
FCEYQDVETAQSALRNLNNTDFNGRPLRVGVAAGESNKDEMAGMQQALGGPILESPYGDP
MEPEKAPEAISKAVASLPPEQMFELMKQMKLCIQNNPTEARNMLLQNPQLAYALLQAQIV
MKIVDPQVAMAMLHRDSSQVPPTGSAAPTPATSQAPMQQAPVIPPQSQPNMPDASMMGGP
RGLGGLLGNIPVSQGPGGPAGMMGGPPRGPGMMGGPGPQGMGNRPQLFPYSRWNGWARSP
EHGWPWTQGMGGPGPQGMGGPGPQGMGGPGQGPPQRPDFGRGSAGPRLIGQGDTRGMPAG
PRPGMPTIKYGTFSNAEPH
NT seq
1138 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgatttggcaccaatttcagctcaagaaagagctaaacgttcagtttttgtt
ggtaatatcccatatgaagctacagaagaagctttaaaggagatatttatacaagcagga
cctgttgtaagcttcaggttggtatatgacagagaaactggtaaaccaaaaggttatggt
ttctgtgagtaccaggatgttgagactgctcaaagtgcgttacgtaatctcaataataca
gactttaatggacgacctttacgtgtgggagttgctgctggagaatctaacaaagatgaa
atggctggaatgcagcaagctcttggtggaccaattcttgagagtccctatggtgaccca
atggaaccggagaaagccccagaagctatatctaaagctgtagccagtcttcctccagag
caaatgtttgaactcatgaaacaaatgaagctgtgtatacaaaacaacccaacagaggct
cgaaacatgttgttacagaatccccagctagcgtatgcactgttacaggcacagattgtc
atgaaaatcgttgaccctcaagttgctatggctatgttacatagagatagttcccaggta
ccaccaacaggaagtgccgctccgacaccagctacatcacaagccccaatgcagcaggca
cctgttattccaccacagtcacagccaaatatgccagatgcatctatgatgggaggtcca
cgtgggctgggtggattgctaggtaatattcctgtatcacaaggtcctggtggtcctgct
ggaatgatgggaggccctccaagaggtccaggaatgatgggtggtccaggaccccagggt
atgggaaatagaccacaactcttcccttattcaaggtggaatgggtgggccaggtcccca
gaacatgggtggccctggacccaaggaatgggaggtccaggacctcaaggtatgggtggt
ccgggtccacaaggtatgggaggacctgggcaaggaccaccacagagaccagacttcggc
agaggatccgcgggaccaagactgataggacagggggatacaagaggtatgccagctggt
ccaaggccaggtatgcccaccatcaagtatggcaccttcagcaatgcagaacctcatg
DBGET
integrated database retrieval system
