Ruditapes philippinarum (Manila clam): 132752234
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Entry
132752234 CDS
T09557
Name
(RefSeq) acetylcholine receptor subunit alpha-like
KO
K04803
nicotinic acetylcholine receptor alpha-1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
rphi04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
132752234
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
132752234
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rphi04040
]
132752234
Ion channels [BR:
rphi04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
132752234
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
132752234
NCBI-ProteinID:
XP_060598534
LinkDB
All DBs
Position
Unknown
AA seq
581 aa
AA seq
DB search
MFKLGWLLVTMFFMYQNTSWVRAGTEAEMRALLAAKLNSSDYSPRVRPIKDTGNVMTLTV
DMYLVGINGVDEVEQKITTTAYMKIVWADSFMTWTPADYGNITQFTLPQEDIWKPDLALA
NAYDTITGLGDSFMYLTITHDGNITWEPYQVFDSTCNIDMTYFPFDSQTCDLQLVTWSST
REMISIVTGDDGFNIDAYEENANWKMLGVSTFDSSTASTSGLSFSIRIRRKPIYYLLNFM
IPIVLLSFLNNFVFVLPCDSGEKTGYAIVLFLSFAIFLLIVTEIMPEGMNTVPIISSYLL
VECIFSTIIVFITIIQLRLHNQGDDTPIPNFLIVLTTFIQGIKAKVCGICCTSEVQKESD
NDNGDETPVKIPLSALNQQSDYSKTIEKSGRKLKEIAQSDGNTVEKPSLSSKAKKRMCCG
AKSLESDESEMKEMIWKEGSSETATELKTESSKTSFRLADILGNENRVAPDAFFNKPQSV
GPIYDGELAIEDVDEIGDIVQKPKMANVQMGLRQGGYRQFRTPEPKEPMNDSISVNSSNG
DSSDEMSWPEVVLALDNLFFVLFLVVNTLATLIAFAVSGAN
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaattaggatggctgcttgtaacgatgttctttatgtaccaaaatacttcttgg
gtacgtgctggtacagaagctgaaatgcgggcactactagcggcaaaactaaacagctca
gattattctccaagggttcgtccaatcaaagacaccggcaacgttatgacccttacagta
gatatgtacctcgtgggcattaacggtgttgatgaggttgaacagaagataactaccacg
gcatacatgaagattgtatgggcagatagcttcatgacatggaccccagcggattatggt
aacattacacagttcaccctcccacaggaggatatttggaaacctgatcttgctctagca
aatgcttacgacacaataaccggtctcggagattcgtttatgtatcttactataacacat
gatggcaatataacttgggaaccgtatcaagtttttgatagcacgtgtaacattgatatg
acatactttccgtttgattcacagacatgtgatttgcaattagtcacgtggtctagtacc
agagaaatgataagcattgtaactggcgatgacggattcaatattgatgcttatgaagag
aacgcaaactggaaaatgttgggtgtgtctacgtttgattcttcaacagcatctacatcc
gggttatcgttttcaatacgaattcgccggaaaccgatttattatcttctaaacttcatg
atacccattgtgttactttcatttctgaataattttgtatttgtgttaccatgtgattcc
ggggagaagactggttacgctattgtcctgtttttatcttttgccatatttctgttgata
gttacagagataatgccagaaggaatgaacactgtccctatcataagtagctatttactg
gttgaatgcatcttcagtacaataatagtattcataaccattattcagcttcgacttcat
aaccagggtgatgatactcctatcccgaactttttaatcgttttaacaacgttcatccag
gggataaaagcaaaagtatgcggtatctgttgtacttctgaagttcaaaaagaaagcgac
aacgataatggcgatgaaacccctgttaaaattcccctttcggctttaaatcaacagtca
gattactctaaaactattgaaaagtcggggaggaaattgaaagaaattgcacaatcggac
ggaaataccgttgaaaagccttcgcttagcagtaaagctaagaaaagaatgtgttgcggt
gcaaaaagtctcgaaagtgatgagagtgaaatgaaggagatgatttggaaagagggttcg
agcgagactgctacagaattgaaaactgaaagttcaaagacctctttcagactagcagat
atactcggcaatgaaaacagagtagccccggacgctttctttaataaaccacaatcagtc
gggcctatctatgatggggaactggctattgaagacgttgacgaaatcggtgacatagta
caaaaaccaaaaatggccaatgtacaaatgggtcttagacaaggaggttaccgtcaattt
aggacaccagaaccaaaagagccgatgaacgattcaatatctgtaaattcgtcaaatggg
gattcctctgacgaaatgtcgtggccggaagttgtcttggcgttagataacttgtttttt
gtcttgtttcttgttgtcaacactcttgcaacccttattgcgttcgccgtatcgggggca
aattga
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