Ruditapes philippinarum (Manila clam): 132752677
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Entry
132752677 CDS
T09557
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1-like
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132752677
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rphi03021
]
132752677
03036 Chromosome and associated proteins [BR:
rphi03036
]
132752677
Transcription machinery [BR:
rphi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
132752677
Chromosome and associated proteins [BR:
rphi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
132752677
PBAF complex
132752677
GBAF(ncBAF) complex
132752677
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
132752677
NCBI-ProteinID:
XP_060599024
LinkDB
All DBs
Position
Unknown
AA seq
443 aa
AA seq
DB search
MPRPGMGPGMPPPQMGMGTPMDRKRQSDSRAAQHMKAKKKKKMADKILPQRVRDLVPESQ
AYMDLLAFERKLDATITRKRLDIQEALKRPMKQKRKLRIFISNTFYPAKPAEGEEGEESV
PSWELRVEGRLLEDAASAKLSDANKTKRKFSSFFKSLVIELDKELYGPDNHLVEWHRTQN
TQETDGFQVKRPGDQNVRCTVLLMLDYQPAQFKLDPRLARLLGVHTQTRPVIINALWQYI
KTHRLQDPHEREYINCDRYLEQIFECKRMKFAEIPGKLHSLLMPPDPIVINHVITVEGPD
SRKTACYDIDVEVDDTLKQQMNSFLLSTQSQNEIANLDSKVCIGGTTKRGIHETVETINQ
LKTNREFFLSFAKDPQEFINNWLISQTRDLKTMTDVTGNPEEERHSDYYVRPWSQEAVCR
YFYGKVQQRRMELEQALGIRSNT
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgccacggcctggtatgggaccagggatgcccccgccccagatgggtatgggaacaccg
atggataggaaaagacagagtgattccagagctgcccaacatatgaaagcgaaaaagaag
aaaaaaatggcagacaaaatattgccccaaagggtgagggatctggtacccgaatctcaa
gcatacatggatttgctggcctttgaacggaaacttgatgccaccatcacaagaaaacga
ctggatattcaggaggccctgaaaagaccaatgaagcaaaagagaaagttacgtatcttc
atatcaaacacattctatccggctaaacctgcggagggtgaggaaggtgaggaatctgtc
ccctcgtgggagcttagagtcgagggcagacttcttgaagatgctgccagtgccaagctt
agtgatgcaaataaaacaaagagaaaattttcatcgttctttaagagccttgttattgaa
ttagacaaggagctgtatggacctgacaaccatcttgttgagtggcatcgtacgcagaac
acccaggagacggatggttttcaggtgaaaagaccgggcgaccagaatgtacgctgtacc
gttcttctgatgctggattatcagccggcacagtttaagcttgatcctcgtttagcccga
cttcttggggttcacacacagacaagaccagtgatcatcaatgccctctggcagtatatc
aagacccacaggttgcaggatccccatgagagggaatacatcaactgtgacagataccta
gagcagatatttgagtgcaagcgtatgaagtttgcagagattccaggaaaacttcactct
ttgttgatgccaccagatcctattgtcataaatcatgtaatcacagtagagggaccggac
tcgagaaaaactgcatgttacgatatagatgttgaagtggatgacacattgaaacaacag
atgaactcgttcctgttgtcaacacagagccagaatgagattgctaacttagatagcaag
gtttgtattggtggaactaccaaacgagggatacatgaaactgtggagaccattaatcag
ctgaagacaaatcgtgaattcttcctgagttttgccaaggatccacaagaattcatcaac
aactggcttatctcacaaaccagggacctcaagactatgacagatgtaacgggtaacccg
gaggaggagagacattctgattactatgtgagaccttggtcacaagaggctgtctgtaga
tacttctacggaaaggttcagcaaagacgcatggagttggagcaagcactcggaatacgc
agcaatacatag
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