Ruditapes philippinarum (Manila clam): 132752818
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Entry
132752818 CDS
T09557
Name
(RefSeq) probable nuclear hormone receptor HR3 isoform X1
KO
K14033
nuclear receptor subfamily 1 group F member 4
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rphi03000
]
132752818
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
rphi03310
]
132752818
Transcription factors [BR:
rphi03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
132752818
Nuclear receptors [BR:
rphi03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
132752818
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
132752818
NCBI-ProteinID:
XP_060599187
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All DBs
Position
Unknown
AA seq
454 aa
AA seq
DB search
MDEASPTSMATVNKAAASSSTFQSAKTQIEVIPCKICGDKSSGVHYGVITCEGCKGFFRR
SQSGPVNYQCPRNKQCVIDRVNRNRCQYCRLQKCIALGMSRDAVKFGRMSKKQREKVEGE
AQLIKQGVSPGVNGYADADIGVHSPNNNSYFTYSGSDNYMYQSPNGYHGYGDSSLSPTGS
SGGVYSPTASPTTPQSVTVVRTVDLLDTVAFGKAIHEAHQRTCLYTADTIAQLKSNTITT
ETITNYQNMTHRVLWTEVAEKLTLAVQQIIEFAKMVPGFMDLSQDDQIMLLKAGSFELAL
LRCTQVYDAATDSVVFGDQFVPLQAFTAFNEEERLLQNQIFDLVKTIQAINLTEAELALF
SATLLVRPDRPGLKDITDIQKLYEKISSALKMELGKNNREDDNMITKLNQITWIVRNLNT
QHITVLNKFKQSQPDVEFPALHKELFSVEGLENS
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagcatccccaacttctatggctacagttaataaagctgcagcttcctcctcc
actttccagtcagcgaaaacccagattgaagtgataccatgcaaaatatgtggagacaag
tcatcaggggttcactatggggtgattacatgcgagggctgcaaagggttcttcagaaga
agtcagtcagggccagtcaactaccaatgtcccaggaataaacagtgtgtcattgatcgt
gtgaacagaaatcgctgccaatactgtagacttcagaaatgcatagctcttggaatgtca
agggacgcggtgaagtttggaaggatgtcaaagaagcagcgtgagaaggttgagggagaa
gctcagttgatcaagcaaggcgtgtctccaggagttaacgggtatgctgatgcggatatt
ggtgtgcattcacctaataacaactcttatttcacatattcaggaagtgataattacatg
taccagtcaccaaacggttaccatggttacggtgattcatctctcagtcctacagggagc
agtggtggagtctacagcccaactgcatcaccgaccacacctcagtcagtcaccgtagtt
cggacggttgatctactagacacagtggcgtttggaaaggcaattcatgaagctcatcaa
cgtacatgtttatacactgcagatactatagctcagctaaaatccaatacgataacaaca
gaaactataacaaattatcaaaatatgacacatcgagtattatggaccgaagtggcggaa
aaacttacattagctgtgcagcagattatagaatttgccaaaatggttcccggttttatg
gatttatctcaggacgaccaaataatgctactaaaagcaggtagttttgaactagcgctg
ttacggtgtacacaggtgtatgatgcagccacagatagtgttgtatttggtgaccagttt
gttcctttacaagcttttacagcatttaatgaagaagaaagacttttacagaaccaaata
tttgatttggtgaaaacaattcaggccataaaccttacagaggcagaattagccttgttt
agtgcaacactattagttaggccagatcgtccagggttaaaggatattacagacattcag
aaactgtacgagaagatttcctccgcattgaaaatggagctcggaaaaaataatcgcgag
gacgataacatgattacaaagctgaaccaaattacgtggatagtacggaacttaaacacg
cagcatataactgtgctaaataaattcaaacagagtcagccggacgtagaatttccagcc
cttcataaggaactgtttagtgtagaaggccttgaaaattcatga
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