Ruditapes philippinarum (Manila clam): 132752955
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Entry
132752955 CDS
T09557
Name
(RefSeq) protein zer-1 homolog
KO
K10350
Zyg-11 protein
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rphi04121
]
132752955
Ubiquitin system [BR:
rphi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
132752955
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZER1-like_2nd
LRR_Zer-1
LRR_4
LRR_14
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
132752955
NCBI-ProteinID:
XP_060599355
LinkDB
All DBs
Position
Unknown
AA seq
668 aa
AA seq
DB search
MANIYRHSDALDIWPPNAPSTLEDICLTYFLDHIFQYLDKTDDSYCLKQGITFPLGLSDK
LLAKIVTHTKHLQSSDDNVFGIFNNRATTNLTELSLRYTAVSSDHLSYLCLHALREIDIA
YCPEIKGNFVKCINQAHKTLRVLQLGGNDQFERMEFLLDGDVQETVPSEQGDNACSLSQS
RSAIFVLPNLRSLSLRDINAFKPMDGVYIENVPLMERVIRPLKSLTHLDLCDCHLEKKTL
EEIGDLDLPNLLSLSLCDVLNGCEAALDNLCKLKTLRHLDVSQGDDTTMFLPVQYPKPTD
RLQVLIASMPNLRSLDISGTNLAGYAPIQKTSHRLEAKSKEDDPPEEEEGLPGNDGRQFN
FLGLLNCADNASHRRNIPAEKVTGDFSEEQILLAVHVYRDKPNLLTRGFNYLFNRFRFET
VKAHCLSLEGILSGMERNKHDKHVQISGSASLFYIVKGCKKEKLTHTQKRKVIGCLLDAM
ERHMAEHTMMRNGCLTLCHFNIPYEVLYCYNRLVRILLQMLRRDYNDDFLLRIGIFLLNS
LACQVEGEHKQILGQTGACIFYIINLLLTYRSFGPILHLVRCYQSLASQYWAVWALCNLT
QVYPEKYCQLLKDEGGLELLEIVTKDPRPIPAIKTLAQQVVTFINNRHVLPPRDNDEMNG
DVVNGNQE
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggctaacatctacagacattcagatgccctagatatatggccaccaaatgctccatca
acactggaagacatttgtttaacctacttcttagaccatatctttcaatacctggataaa
actgatgactcatactgtttaaagcaaggaataacattcccattgggattaagtgacaag
ttacttgccaagattgtaacgcatacaaagcatttacaaagttcagatgacaatgttttt
ggaatatttaacaatcgagccactacaaaccttactgagctttcattgagatacacagca
gtgagttctgaccaccttagttacttgtgtcttcatgcattgcgggaaattgacattgct
tattgtcccgaaataaagggaaattttgtgaagtgtattaaccaggctcacaagactttg
cgggtattgcagcttggtggcaatgaccagtttgagcgcatggagtttcttctggacggg
gatgttcaagagactgttccaagtgaacagggtgataatgcttgtagtttatctcagtct
agatcagcgatatttgtgttaccaaacttgcgatcattgtccttgagagatattaatgca
tttaaaccaatggatggggtttatatagaaaatgtacctcttatggagagagttattcgt
ccattaaaaagtctgacacatttagatttatgtgactgtcatctggagaagaaaacttta
gaggaaattggagatttagacttgcccaaccttttgtctctaagcctctgtgatgttttg
aatggatgtgaagcagcattagataatctctgtaaattgaaaacattgagacacctagat
gtatcacaaggtgatgatacaacaatgtttttaccggtgcaatacccaaaacctacagac
cgcctacaggtcctcatagccagtatgccaaacttgagatccctcgacatttctggcaca
aatctggcaggatatgcaccaatacagaaaacctctcatcgtcttgaggcaaagtcaaaa
gaggacgatcccccggaggaagaagaagggttaccaggcaatgatggtagacagtttaac
ttccttggacttctcaactgtgcagataatgcctcgcataggagaaatatacctgctgaa
aaggttacaggggatttttcggaagaacagatcttgttagctgtgcacgtatatagagac
aaaccaaatctgctgactcgtggatttaattacttgttcaacaggtttagatttgaaact
gtgaaagcccattgtttatccttagagggtatcctgtccggtatggagcgtaacaagcat
gataaacatgtacagatatctggtagtgcatcactcttctatattgtaaagggatgtaaa
aaagaaaaactcactcacacacagaaaaggaaagttattggatgtttactggatgcaatg
gagaggcacatggctgaacatactatgatgaggaatggctgtcttacattgtgccacttt
aacataccctatgaagtgttgtactgttacaatcgtctggtgagaattctcctgcagatg
ttacgaagggactataatgatgatttcctgttacgtattggcatatttctgttgaacagt
cttgcttgccaggtagagggagaacataaacaaatcctcggacaaacaggagcttgtatt
ttttatataataaatcttttgcttacttacaggtcctttggtcccattcttcatcttgtt
agatgctaccagtcccttgcctcgcagtactgggcagtatgggcactatgcaatctcact
caagtctatccggagaaatattgccagctattgaaggatgaaggagggttagagttactg
gagatagtgactaaagatcctagacctattcctgcaattaaaacattggctcagcaagtg
gtcacttttataaacaataggcatgttttaccacctagagataatgatgaaatgaatggt
gatgttgtaaatgggaatcaagagtaa
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