KEGG   Ruditapes philippinarum (Manila clam): 132753333
Entry
132753333         CDS       T09557                                 
Name
(RefSeq) WD repeat-containing protein 18-like
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
rphi  Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rphi03009]
    132753333
Ribosome biogenesis [BR:rphi03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    132753333
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz EIF3I WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP Beta-prop_SPT8 NBCH_WD40 WD40_RFWD3 Beta-prop_EML ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_VPS8 Ge1_WD40 WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_Vps41 WDR54 Beta-prop_NWD2_C CNH Beta-prop_EIPR1 WD40_alt Beta-prop_Nup120_160 Beta-prop_NUP159_NUP214 Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 132753333
NCBI-ProteinID: XP_060599755
LinkDB
Position
Unknown
AA seq 420 aa
MSAPIEVLFTSDLSGQLWNTCVWDIHTGTSLTSYKGESTNHRGLCILGNQYLLGTSCSKP
LIHVWALQRREQHQLKIICPGRVTALAVSPDGTYCIAAVGEKIHLWQVCTGNLMSVLSRH
YQTVNVLRFTDNCSHFISGGEDNLVIVWSLVSVLSSINNPTRKPEPVRIWSSHSLPVTDV
HVGKGGSRSRVVSSSLDQTCKIWDMVSGELLQTVVFPTSLMSVTMDTAEYRLFAGGSNGD
VYCINMYGQPIRTERHIESYDQEGVSCLKGHSKQVTCVSVNIDGTKVVSGSHDHTVKIWD
VFSGQCVRTLQHKGPVTNTLIVPTPPSVINAEIKPTLHLQMFKRHLYTGADNSEDSGALN
IRISGHERGDIKDVDMSELLKGQFSDSKISNLKEELQQVKAINQEMFNFTVDKILHNKNP
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgtctgcccccattgaggtactgtttactagtgatttgtcaggtcagttatggaatact
tgtgtttgggatatacacactggtactagtctgacatcttacaaaggagaaagtaccaat
catcggggattgtgtatccttggtaaccagtatttactgggaacatcatgttctaaacct
ctcattcatgtctgggccttacaaagaagggagcagcatcagttgaagattatctgtccc
ggcagagttactgcccttgctgtatcacctgatgggacatactgtattgctgcagtggga
gaaaaaattcatttatggcaggtgtgtacaggaaatttgatgtctgttttgagtcgtcat
taccaaacagtgaatgttttaagatttacagataattgcagtcattttatatcaggggga
gaagataatctagtgatagtatggtcacttgttagtgtgttatcatctatcaacaatcca
acaaggaaaccagagcctgtgaggatatggtcgagtcattcattacctgtaacagatgta
catgtaggtaaaggtggaagcagatctcgtgttgtttcatcatctcttgaccaaacctgc
aagatctgggatatggtatctggagaactgttgcaaacagttgtgtttccaaccagttta
atgtctgtcacaatggatacagcagaatatagattgtttgctgggggcagtaatggagat
gtttattgtataaatatgtatggtcagccaataagaacagagagacatatagaatcatat
gaccaggagggtgtttcttgtctgaaagggcacagtaaacaagtaacatgtgttagtgtt
aatatagatggtaccaaggtggtttctgggtcacatgatcacactgttaaaatatgggat
gtcttcagtgggcaatgtgtgagaacacttcaacataaaggtccagttacaaacacatta
attgttcctacccctccatctgtgataaatgctgaaattaagccaacactccatcttcag
atgttcaaacgtcatttgtatacaggggcagataactctgaagatagtggtgcattaaat
atacgtataagtggacacgagagaggagatatcaaagatgttgatatgtcagagttacta
aaaggacagtttagtgatagcaaaatttcaaacctaaaggaagagctgcagcaagttaaa
gccatcaatcaagagatgtttaattttactgttgataaaatcttacataataaaaatcct
tga

DBGET integrated database retrieval system