Ruditapes philippinarum (Manila clam): 132753429
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Entry
132753429 CDS
T09557
Name
(RefSeq) E3 ubiquitin-protein ligase MARCHF6-like
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
132753429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rphi04121
]
132753429
Enzymes [BR:
rphi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132753429
Ubiquitin system [BR:
rphi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
132753429
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MARCHF6_C
RINGv
TP_0976_N
POPDC1-3
Motif
Other DBs
NCBI-GeneID:
132753429
NCBI-ProteinID:
XP_060599884
LinkDB
All DBs
Position
Unknown
AA seq
802 aa
AA seq
DB search
MDVDDTDEPQTDICRVCRCEGTSDKPLYHPCVCTGSIKFIHQDCLVQWLKYSRKEFCELC
KHRFAFTPIYSPDMPKRLPIKDIVSGLLGSVGKAVRYWFHYTLVTFAWLGVVPLTACRIY
RCLFTGSVSSLLTLPLDMLSTENIASDCFHGCFVVACTLCAFISLVWLREQILHGGGPDW
LEQDVPGVQQRNPLDIGVVNNLVGLGGGGARDGAANQNNQNEDNNAEAANEGEEEVEEEG
ADNGNNAAQDDNNWNPIEWDRAAEELTWERLLGLDGSLVFLEHVFWVVSLNTLFILVFAF
CPYHIGHFTMIGMKMEDVVEASHFEGLLTTLIGYVVIAFSLIFLYAICSLIRLKRFVVND
SSIIPFPRVLVCVFGCQDNRKVFPGFLPYNVMLSSDAPVSELSLELLLLQVVLPALLEQG
HTRMWLKGLVRGWTLCVAWMLNLRSYLVGDVQLDDHDNVIQGDAAAAPAGPPPPPAGNHG
NNAPNNPVPPPGQPGGLAAAHQAMLQAGGPIGFQSYKRPNLFYFRIVLLVALMCFTLFAA
SVVCLILPVFFGRKLMSLWMGEAKIHELYTAACGLYVCWLMLRIGTVLYNWIPQGTAAIL
NKLKQWLILALKSLFVAVILMGVVPLLLGLLFELVVVAPLRVSLDQTPVFFPWQDWALGV
LHTKIICAVTMMGPQWWLKRVIEQVYNDGLRNMNLKFILYKLCFPVIGVLGMSLSVPYVI
ARSLVPALGFDFDVQNFVLRRIYPFLLACVVMVFVCVFQARQFKRLYEHIKNDKYLVGQR
LVNYDPKRFVRKLTTEQTAKQT
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcgacgacacagatgagccacagacagatatatgtcgtgtgtgcagatgtgag
gggacgtcagataaacctctgtatcatccatgtgtctgcacgggcagtatcaaattcata
catcaagactgtctggtacaatggttaaaatacagcagaaaggagttttgcgaactttgc
aaacatcggtttgcttttacaccaatttactcaccagatatgccaaagaggttacctata
aaggatatagtgagtgggttgttaggtagtgtaggaaaagccgtcagatattggttccat
tatacactcgtcacgtttgcctggcttggtgttgttccattaacagcttgtcgtatttac
agatgtctgtttactggatctgtgagctcattattaacattaccacttgatatgttatct
actgaaaatattgcatccgattgtttccatggttgttttgttgtggcgtgtacattatgt
gcatttatcagcttggtgtggctacgtgaacagatcctgcatggaggagggcccgattgg
ttagaacaggatgtgcctggtgtacaacaaaggaatcctttggatatcggtgttgtaaac
aatcttgttggtttgggagggggcggagctagagatggagcagccaatcagaacaatcag
aatgaagataacaatgccgaggcagccaatgagggtgaagaagaggtggaagaggaaggt
gcagataatggaaataatgctgcacaagatgacaataattggaatccaatagaatgggac
agggcagctgaagaacttacctgggagaggcttcttggtttagatggctctcttgtgttc
cttgaacatgtattctgggttgtgtctcttaacacattatttatacttgtatttgcattt
tgtccatatcatattggtcactttacaatgattggaatgaagatggaagatgtggttgaa
gcatcacattttgagggtttacttacaacgttgataggctatgttgttatagcattctct
ctgatcttcttgtatgccatctgttccttgatcagattaaaaaggtttgttgtcaatgat
tcttcaataattccgtttccacgagtgttggtctgtgtttttggttgtcaagataacaga
aaagtgtttccaggtttcctgccatataacgtcatgttgtcaagtgatgcacctgtcagt
gaattatcactggaactgttgttattacaagtggttctacctgccctgctagagcaaggt
catactaggatgtggttaaagggcttggtgcggggctggaccctgtgtgtagcctggatg
ctgaatctacgatcataccttgtcggggacgtgcagctcgacgaccatgataatgttata
caaggtgatgctgcagcagctcccgctggtccaccacccccacctgctggtaaccatggt
aacaatgccccgaacaatcctgtacctccaccaggccagccagggggacttgcagcagcc
catcaagctatgttacaggctggagggccaataggctttcaatcatacaagaggccaaat
ctcttttattttagaattgtgttgctggtagctctaatgtgttttacattgtttgcagcc
agtgttgtttgtcttatactgccagtattttttggccgaaagttgatgtcattatggatg
ggagaagctaaaattcatgaactttatacagctgcgtgtggattatacgtttgttggtta
atgttaaggataggaacagtgctgtataactggataccacagggtactgcggccatactc
aataaacttaaacagtggcttattttggcattaaagtcactatttgtagctgtaattttg
atgggagttgtgccattgttactgggtctgttgtttgagcttgtagtggtagcaccattg
agggtgtcactggatcagaccccagtcttcttcccctggcaggactgggcattaggtgtt
ttacatactaaaattatatgtgctgttacaatgatgggtccacaatggtggctcaagcgt
gtcattgagcaggtatataacgatggattacgcaacatgaatctcaagtttattctttac
aagttatgttttcctgtcattggtgtgctaggcatgtcgttatctgtcccatatgttata
gcaagaagtcttgttccagcattaggttttgattttgatgtacagaattttgtattacga
agaatttacccattcctgttagcgtgtgttgttatggtgtttgtgtgtgtattccaagct
agacagtttaaaaggctttatgaacatattaaaaatgacaaatatttagttggtcaaaga
ctcgtaaattatgatccaaagagatttgttcgaaaattaaccacagaacagacggcgaaa
cagacgtga
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