Ruditapes philippinarum (Manila clam): 132753457
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Entry
132753457 CDS
T09557
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rphi03009
]
132753457
Ribosome biogenesis [BR:
rphi03009
]
Eukaryotic type
90S particles
Other 90S particles
132753457
Pre-60S particles
Other pre-60S particles
132753457
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
HEAT_GCN1
I-TevI_ZnF
RIX1
Motif
Other DBs
NCBI-GeneID:
132753457
NCBI-ProteinID:
XP_060599921
LinkDB
All DBs
Position
Unknown
AA seq
1292 aa
AA seq
DB search
MGSKTKTSKLPRLHKGKAKRWKKGHSSTSNPEKKTYREAARNRFFSKNDGPSTLTVDALA
KHDKSQGENDAESMATESDQQTMGTFKTWATNWTDCTNATFSKVHRYWASNSALHKEILA
VLAAVTEVIKSEGGKETETEYFAALMTSLEGAEGVESITAIVYLLSLVLKRVPVPVLRNK
FSEVSKCLLDLMGQYADEDATSLLKSLITSLAFVLRSQERAVWNNSSTQQIYKGLLTFIT
HKKPKIRRTAQQGVCIVLKGSLFMLQDNSPSHHPAAAMTAKHCIQVIEATGGMGEAIDTL
HTLSLLKQVLPVFPQNSVKTVCETILKVMTLSNVMVTASSMQVLHSLFQAKPKPETLPAE
LNAQIITALYDYQPSENDVQPTQAWLVVMETAHVNLSSLDGKLCISHLPRLFSAGMVCLL
SVKPEITQAAAKSLKCVISSCIALLAESLAPQLNTEAGNTSIHKIIKAIESGLGYQFHAS
WGLVLQMFAVLYQSLGKQSPAAFTKSLSTIAELRDSVRFPYKGELDHAVGCAVKTMGPRT
VLSAIPLQITGQSDDLDFPRSWLLPVIRDNVQETELSFFTSYFLPLAAKLRQRALELSDQ
QNIVASKTYEALQLQIWSMLPGFCTRPTDLAQSFKGIAKVLGTAISEREDLRMDVMASLR
KLINQSITNDDAKAELSRFSKNFLPILFNLYTTDPVRDKDPSKLAVLETVKSYLQITDKQ
AVATYCSKCRERLTEENITAYKRHALHDLLIGFLPYLVETELLNVYQLAIEHLQDTDKSI
QKKCYRILEEICSGKSVETRQFVIENLASIQTSLLSSLSASSPSSKAPRLRCLVNIFQLL
DKRQDDFLLAVVPEAILCTKEVAERARAASYNLLVEMGQAAKRWSDNNDNGVLEEYFKMV
MAGFAGSPQMISATLLALTRIMYQFKAEISSGMLESIIDSVCLLLRSKSREVVQSALAFL
KVTVSVYPVTTLAQYLKSIMESLTSMKEDCHHHFRFKAKEVYTKLIKKFTYETIYNMATD
SIRKQLVNIRKTLERSKKKRRADEGSDSDDEQEHFNTQVESIDELLKDSDSEPEEAEKDK
RPKLKAKRSIKGNQETGKAWLHEGGDDDITDFMDTSAAKKVMATKPVEKKEKKMDSGFKT
APDGRLIITESSDDEGGNSEDEDIDELLEALEKGRDSGKIKQTRKRKIEDLGGSDDETSS
PPKYRAGGGGIHRPLNKQDKPARKPQFGSEYKSKKGGGDVKKVGKHDPYAYVPLDFTSLN
KRKQAKMKGQFKNLVRGAKKGAAKGKKAKKRS
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtaaaactaaaaccagcaaacttcccagactgcataaaggaaaagcgaaaaga
tggaaaaagggccacagttcaacgtcaaatccagaaaagaagacttacagagaagctgca
aggaatagatttttcagtaaaaatgatgggccaagtacattgactgttgatgccctagca
aaacatgacaaaagtcaaggtgaaaatgatgctgaatccatggcaacagaatcagatcag
cagactatgggaacctttaaaacatgggcaactaattggacagactgtacaaatgcaaca
ttcagcaaagttcatcggtactgggcctctaattcggctctacacaaggagatccttgca
gtccttgctgccgtgacagaagtgataaagtcagaaggtggaaaagaaaccgagacagaa
tattttgctgcattgatgacatcactagaaggtgcggaaggtgtagagtctattacagcc
attgtttatctgttgtcactagttttaaaaagagtaccagttccagtattgaggaataaa
ttttctgaggtttcaaaatgtttgcttgatttgatgggtcagtatgctgatgaagatgct
acttctcttcttaaatctttgattacatcgttggcatttgtgttacgatcacaagaacgt
gctgtatggaacaactcctccacacaacaaatctacaagggacttcttacattcataact
cacaagaaaccaaagataaggagaacagcacagcaaggtgtatgtattgtattaaaggga
agtttatttatgctacaagacaattccccgtcacatcaccctgctgcagccatgacagcc
aaacattgtatacaagtcattgaggccacaggaggtatgggagaggctatagatacgtta
catacattatccttgttgaaacaagttcttcctgtgtttcctcagaacagtgtgaaaact
gtatgtgaaactatactcaaagttatgacccttagcaatgtgatggtaactgccagcagt
atgcaggtgttgcacagtttgttccaggcaaaacctaaacctgaaaccctaccagctgag
ctcaatgcacaaattataacagccttgtatgattaccagccatcagaaaacgatgtccag
ccaacacaagcttggctagttgtcatggaaacagcacatgtaaatttatcaagtttggat
gggaaactttgtataagtcatttaccacgactattctccgctggaatggtgtgtttgttg
tcggtaaaaccagaaattacacaagctgctgctaaatcattgaagtgtgtgataagcagt
tgtattgccctattagccgagagtttggcaccacagttaaatacagaggcaggtaataca
tctatacataagataataaaggcaatagagagtggacttggatatcagtttcacgcctca
tggggacttgtacttcaaatgtttgccgtattatatcagagtttaggcaaacagtcacct
gcagcatttaccaagagtttgtcaacaatagctgaactaagagacagtgtaagatttcca
tacaaaggagaacttgaccatgctgtgggctgtgcagttaaaacaatgggtcctaggaca
gtgcttagtgcaatacctctacagatcacagggcagagtgatgatctagattttcccagg
agttggttattacctgtaatcagagacaatgttcaagaaacagaacttagcttctttaca
tcatatttcctaccactagcagcaaaactcagacaaagagcattagagttgtctgatcag
cagaatatagtagcatcaaaaacatatgaggcattacagttacagatttggtccatgttg
cctggtttttgtactcgacctacagatcttgctcagtcatttaaaggaatagctaaagta
ttaggtacagctataagtgagagagaagatctgagaatggacgttatggcttcattaagg
aaacttatcaaccagagtatcaccaatgatgatgctaaggcagaattatccaggttttct
aagaattttctgcctatcctgtttaacttgtacacaacagaccctgtccgtgacaaagat
ccatcaaaacttgccgtgttagaaacagtgaaatcatacctgcaaatcactgataaacag
gctgtggccacatattgtagtaaatgtagggaaagactaacagaagagaacatcacagca
tataaaagacatgcgttacatgatttactgataggatttttaccatatctggttgagacg
gaattgttgaatgtttaccagttagctattgaacatttacaggatacagataaatccata
cagaagaaatgttaccgtatactagaggagatatgttccggaaagtctgttgagacaaga
cagtttgtgatagaaaacctcgccagtatacaaacttcgctgttatcctcactgtctgct
tcaagtccatcttccaaagctcctagattgagatgtcttgtcaatatttttcaattactg
gacaaaagacaagacgatttcctgctagctgttgtaccagaggctatactgtgtactaaa
gaggtggcagagagggccagggcagcttcatataatctccttgttgagatgggacaagct
gctaaacgttggtcagataataatgataatggtgttttagaggaatatttcaagatggtt
atggcaggatttgcaggctccccacaaatgattagtgcaacactacttgccttaacaaga
atcatgtaccagtttaaagctgagatatcaagtggaatgttggaatcaattatagacagt
gtatgcttattactgaggtcaaagtcacgtgaggtcgtacaaagtgccctcgcatttttg
aaggtcacagtttcagtgtatccagtcactacactggcacagtatcttaaatctataatg
gagagtttaacaagtatgaaagaagattgtcaccatcatttcagatttaaagctaaggag
gtttataccaagctcattaaaaagtttacctatgagacaatctacaacatggcaacagac
agtatacgtaaacagcttgtaaatatacgtaaaactctggaacgatcaaagaagaagagg
cgagctgatgagggtagtgacagcgacgatgaacaggagcatttcaatacacaagttgag
agtattgatgagcttctgaaagattcagattcagagcctgaagaagctgagaaagataaa
aggccaaaattgaaggccaagagatcaataaaaggtaaccaagagacagggaaggcgtgg
ctacatgaaggtggagatgatgacatcactgattttatggacacttctgctgcaaagaaa
gtcatggctacaaagccagtagaaaagaaagaaaagaagatggattctggatttaagaca
gcacctgatggtagacttattattacagaatcgagtgatgatgaaggaggaaatagcgag
gatgaagatatagatgagttactggaagctctggagaagggacgtgactctggaaagata
aagcaaaccaggaaaagaaagatagaagatcttggcggatcagatgatgagacctccagt
ccacctaaatatagagctggaggtggtggtatacacagacctctcaacaaacaagacaaa
ccagctagaaaaccacaatttggtagtgaatacaagtcaaagaagggaggtggagatgtg
aagaaagttggcaaacatgatccttatgcctatgttccactagatttcacaagtcttaac
aaaaggaaacaagcaaagatgaagggtcagtttaagaatctggtaagaggagcaaagaaa
ggggctgccaaagggaagaaagcaaaaaagagatcttga
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