Ruditapes philippinarum (Manila clam): 132753481
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Entry
132753481 CDS
T09557
Name
(RefSeq) uracil-DNA glycosylase-like
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
132753481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rphi03400
]
132753481
Enzymes [BR:
rphi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
132753481
DNA repair and recombination proteins [BR:
rphi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
132753481
Prokaryotic type
132753481
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
132753481
NCBI-ProteinID:
XP_060599945
LinkDB
All DBs
Position
Unknown
AA seq
247 aa
AA seq
DB search
MACNGQLNLNDGLWKEKLASQFNQTYFITLQEKLQKEYSLGKVYPPQTLIYNALNLTPLE
TVKVVIVGQDPYHGYGQAMGLAFSVPIGIPVPCSLQNIYKMLYNDPRIPEFVISNGHLVN
FGNRGVQIPNHGCLVSWAKQGVLLLNAILTVEAGMPNSHAKIGWQYFTDEVIKIVSDYQD
HVVFILMGEFAKSKKYLIDVNKHDIIETTHPASRASYQNMFQESNCFSVCNTLLEGFGKI
PVYWNSL
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atggcatgtaatggacagcttaatctgaacgacggtctatggaaagagaagctggcatca
cagtttaaccagacatattttataactttacaagaaaaattacagaaagagtatagccta
ggcaaagtatatccaccccaaacacttatatacaatgctcttaatctcacacctttggaa
acggtcaaagtggtgatagttggacaggatccttatcatggctacggtcaggccatgggt
ttagccttttccgtaccaattggcataccagtcccatgctctttgcagaacatatataag
atgttatacaatgacccgaggattcctgaatttgtgatatctaatggccatctcgtgaat
tttggtaatcggggagtgcagatacctaatcatggctgcctcgtgagttgggccaaacag
ggagtgttgttgttgaatgctatactaactgtggaggccggtatgcctaactctcatgct
aaaattggatggcagtattttacggacgaggttatcaaaatagtgagcgactaccaagac
catgtcgtcttcatactgatgggagaatttgcaaaatcgaaaaagtatctgattgacgtg
aataaacatgatatcattgaaactacgcatccagcctctcgtgcatcatatcagaacatg
tttcaagaatctaattgtttttctgtttgtaatactttgttagaaggattcggcaaaata
cctgtgtactggaattcgctttag
DBGET
integrated database retrieval system
