Ruditapes philippinarum (Manila clam): 132753523
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Entry
132753523 CDS
T09557
Name
(RefSeq) nicastrin-like isoform X1
KO
K06171
nicastrin
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
132753523
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ncstrn_small
Nicastrin
Peptidase_M28
Motif
Other DBs
NCBI-GeneID:
132753523
NCBI-ProteinID:
XP_060599986
LinkDB
All DBs
Position
Unknown
AA seq
722 aa
AA seq
DB search
MTSKGRLLVNDSSIEEGNKMFIFYVLLPIFFLFSNGYCERTKEKIYVEIKSGGRSPCFRR
LNGTHQIGCTSDPKGNVGVVYYVNNTQSDLDWLLNEGPHKPYAVLLNPKDFHMKTVKRLL
DSGKVNGIMVIQVPDKEHKYPPAEAFSPDQSCPNQGYGLYSGDATYGDCSKNQWNSVGEG
LMFQDIGIPIFVLKEESDVDFIIEKCYKKFNAPSVSGVAREYPLCAVQLKDRMDGAKDSE
TCTRRTNHQMNLNPDRYCDPLGDQNVYATVKDVTKDMRREEKSVIVVAARMDSFSMFEDN
YPSADNHVSGIVALLAVSEAIGKVKDKIRDSNTTKDVMFTFFQGEAFDYIGSGRMVYDME
HNEFPPSDNLQKINLKHISHFVEVNQLAYRDDGKIWIHTDPLSRPKIPEVEYMVTGLKDI
DPSLIDEVDKDQPLPPASAQSFLKKTQLPTVVITDHRKEYTNKFYNSRLDLASNIKASCP
DKTNLTECYDTVSKQASNLTPVANLLAKFLYTLATGDNSTDNVTVDVNTVQHLLFCYLIS
PNCELFKQSLDKGKADQLADEPYQFYVGVNTQTNNYTALTKQMLLVYLGDHVENATKDTC
KGGEWVQGPLNENGTRTNGYCVRGNANLSKAVSKAFEIDDYDFKSRQYSTWAESSWQFNA
MNVRVFLIPSKKFETVTLSVGVIMLLVSMVIVYFINSRVEVLFAGARRDYRTIDTNNDNG
ML
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcaaagggaggttacttgtgaatgattcatcaattgaggaaggaaacaaaatg
tttattttttatgtgttattacccattttctttcttttttctaatggttattgtgagaga
acaaaagaaaagatctatgtggagattaagtcaggtggaagatcaccttgttttagaagg
ctaaatgggactcatcagattggatgcacatctgatccgaaggggaatgtcggtgttgta
tattatgtgaataatacacagtcagatttagattggcttctaaatgaaggtccacataaa
ccatatgctgtattactgaatccgaaagattttcacatgaagacagtaaaaagattactt
gattctggtaaagtgaatggtataatggtaatacaggtaccagataaagaacataaatac
cctccggccgaggcattctctcctgatcagtcctgtcctaaccaaggctatggtctatat
agcggggatgctacttacggagactgttcaaagaatcagtggaactctgttggagaagga
ttaatgttccaggacattggtatacctatatttgtccttaaagaagagtctgacgttgat
tttatcatagaaaaatgctataaaaagttcaatgcaccatctgtcagcggtgtagcgaga
gagtatcccctatgcgcagtacagttgaaagaccgtatggacggagcgaaggactcggaa
acttgtacgcgtagaactaaccaccagatgaacctcaatcctgaccgatactgtgatcct
ttaggcgatcagaatgtgtatgccacagtgaaagacgttacaaaagatatgaggagagaa
gaaaaatcggtcattgttgttgcagctaggatggattctttctccatgtttgaggacaac
tacccaagtgcagacaaccatgtgtcaggtattgtggctctgttagccgtgtctgaggct
attggaaaggtcaaggataagattcgagattcaaacacgaccaaagatgttatgtttacg
ttctttcaaggggaagcatttgactatattggatctggaagaatggtgtacgatatggaa
cataatgagtttcctccgtctgataatttgcaaaagataaacctgaagcatatctcacat
tttgtcgaggttaaccagctagcctatagagatgatggaaaaatctggatacacactgat
cccctctcacggcctaaaatacccgaggttgaatatatggtgaccggattgaaggacata
gatccctcattaattgatgaggtcgacaaagatcagccgctaccccctgccagtgctcag
tcgttcctgaagaaaacacaacttcctacagttgtcattactgaccatagaaaagaatac
acaaacaaattttacaacagtcggcttgatttagcgtcaaacatcaaagcaagttgtcct
gataaaacaaaccttactgaatgttatgatacagtatctaagcaagccagtaacctgaca
cctgtggccaacctactggctaaattcctgtatactctggccacgggagataactctaca
gacaatgtgacagttgatgtgaatactgtacaacatttattgttttgttacctgatatct
ccgaattgtgagctgtttaaacagagtctggacaagggtaaagcagatcaactagctgat
gaaccataccagttttatgttggtgtcaacacacagaccaacaactacactgccttgacc
aaacagatgcttttagtatacctaggagaccatgttgaaaatgctaccaaagacacatgc
aaaggtggcgagtgggtacaaggaccgttgaatgaaaatggaaccaggactaatggatac
tgtgtaagaggaaatgcgaacttgtcaaaggcagtatctaaagcatttgaaatagacgac
tatgatttcaagtcacggcagtattcaacatgggcagaaagcagctggcaattcaatgca
atgaacgttagggttttcttaatacctagcaaaaaatttgagactgtcacgttgagtgtc
ggagtaattatgcttcttgtttccatggtgattgtatatttcatcaacagccgggtggaa
gtactgtttgctggtgcccgacgtgactatagaactatagacacgaacaacgataatggc
atgttgtag
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