KEGG   Ruditapes philippinarum (Manila clam): 132753851
Entry
132753851         CDS       T09557                                 
Name
(RefSeq) DNA repair protein REV1-like
  KO
K03515  DNA repair protein REV1 [EC:2.7.7.-]
Organism
rphi  Ruditapes philippinarum (Manila clam)
Pathway
rphi03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    132753851
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rphi03400]
    132753851
DNA repair and recombination proteins [BR:rphi03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Y-family DNA polymerases
    132753851
SSDB
Motif
Pfam: IMS IMS_HHH_1 IMS_C BRCT_2 BRCT REV1_C PTCB-BRCT UBM LIG3_BRCT POLH-Rev1_HhH IMS_HHH RPS31
Other DBs
NCBI-GeneID: 132753851
NCBI-ProteinID: XP_060600372
LinkDB
Position
Unknown
AA seq 1241 aa
MSSRGRNTRSRSRDDGWEVWGGYMNAKKQKLQKQFDEDAPGQLKKEGSGSKIFAGISIYV
NGYTKPSSDELKRLMMLHGGNYEHYLYRTRVTHVIATNLPNSKVKELKGLKVVRPEWITE
SIAAGKLLSYAKYQLYTAQCGLQKGLHTFTTSTENSNQSEGSFQSKDSNISDISLSTYVK
DSSLNRISSTNSGNGVSCGKTQVKDISDGKLNKSVKVISPGKTADARDPKFLNEFYSNSR
LHYLSTWKAEWKNYVNELQVKGGNFPGREQLRQIVQERAVTPDEPLSNKRRGKPSRCVMH
IDMDCFFVSVGLRKRPDLRGKPVAVTHSKGKSQTPDPLADPVLERRQWEEKKLQRRGKGK
KTIKPVDTSSLDDDMTFPDQSDSDDDVTDDVINTVSAVTMTTVESFHSMAEIASCSYEAR
QAGVKNGMFMGRAKSICPDLVTIPYDFDGYKQVSKTLYDTVASFTHDIEAVSCDEMLVDC
TDLLADTGATPLEFATLLRSQLFQQTQCPASAGIGSSILLARMATRKAKPNGQFYLTEDV
VSDYIKSQPVKDLPGVGYSTTRRFEAMKVVTCDDLQKVALDTLQKEFGPKTGQSLFRYCR
GQDDRPIKMEQQRKSVSAEVNYGIRFDTDCEATKFMEELSEEVCNRLKGIHMKGKTITLK
LMVRREDAPKHTSKFMGHGICNNFSKSVTLPMATDDTKIVAKETIGLLRSHKVDAADLRG
IGIQVNKLEPAEVGCTGNNKKIPSILNFTVKSNSPNKTTKQQSNAAETVGDKLGVNVETR
HTEIRRKHGTPSKLVTDKRMLSCDKNAVSEAGNEIMDTNKMSENTESTEAEVIDLVQSEV
ESRLPASSDQDLLQDLVSRQRVDVSLPPLPCLPDIRTPDSGRKTRKCHTPEIEPHPPSDI
DYFPSPSQIDPDVLCELPSEIREQIEREVKQRRAGPVRRNMRTSQSTDASCSHWQQQTNN
RSEHSHSEVDGHAQDVIVALPSPSQIDLSCLEALPENLQAELRQAYARQNSKLTTKGGNT
LQLKQAKSPAKSPNKRSPGKSSPNFKIPRGKPSGRGRKKGTSKKTLFKDQARAVQQQSSS
HLSVSESLNSARETTSTTASNGVGDITSSSSHVQCYNNETLVNSSCVGDIEGTEVNYTSE
TVCCVNLCGAVTLQDVRHLLKEWIHSTPVPQEDDEEILKKYMVDLVTDKNLEQVDLLLKY
MLRNINRLHDGEWLHSLKRIFIHTQSVVYDLYGSQLVSIKL
NT seq 3726 nt   +upstreamnt  +downstreamnt
atgagtagtagaggtcgtaacactagaagcaggtctagagatgatggctgggaagtgtgg
ggtggttacatgaatgcaaagaaacagaagttacaaaaacaatttgatgaagatgcccca
ggtcagttgaagaaggaaggcagtggctcaaagatatttgctggcataagtatatatgtg
aatggttacacaaaaccatcatctgatgagttgaagagattaatgatgttacatgggggt
aattatgaacattatctgtatcgaacccgtgtcacccacgttatagcaacaaacttacct
aacagtaaggtgaaggagttgaaaggattaaaagttgtccgacctgaatggatcactgaa
agtattgctgccggaaagcttctttcatatgcaaaatatcagctgtatacagcgcaatgt
ggattacagaagggtttacatacatttaccacatcaacagagaacagtaaccagtctgag
gggagtttccaatctaaagatagtaacattagtgatatttcattgtccacttacgttaaa
gacagttctttaaatagaatcagcagcacaaacagtggaaatggagtttcctgtggaaaa
actcaagttaaagatattagtgatggtaaattaaataagagtgttaaagtgatctcccct
gggaagactgcagatgccagagatcctaaatttctaaatgagttttacagcaactcgagg
ctacactacctatctacttggaaagcagaatggaaaaattatgtcaatgagctacaggta
aagggaggtaattttccaggcagggaacaacttagacagattgttcaggaaagggcagta
actcctgatgaacctttatcaaacaaaaggagaggaaaaccatcaagatgtgtgatgcac
atagatatggattgtttctttgtttctgttggactgaggaagagaccagacttgagaggt
aaacctgtagctgtaacacattccaagggtaaaagtcaaacccctgacccgttagctgat
ccggtactggagagacgtcagtgggaggagaaaaagttacagagaagaggcaaaggcaag
aaaacaattaaaccagtcgacacaagcagtttagatgatgatatgacatttccagatcag
tctgactctgatgatgatgtcacagatgatgtcatcaatactgtcagtgctgttactatg
acgacagtagaatcattccactcaatggctgagatagcttcttgcagctatgaagcaagg
caggctggtgttaagaatggtatgtttatgggtagagctaagagtatatgtccagacctt
gtcacaataccttatgactttgatggctacaaacaagtctctaaaacattatatgatact
gtagcaagttttacacatgatatagaggctgtaagttgtgacgagatgttagttgattgt
acagatttactggcagatactggagccacacctctagagtttgccacactacttcgttct
caactcttccaacaaacacagtgtccagcatcagcaggcattggatcaagtatactacta
gccaggatggcaacaaggaaggctaaacctaacggtcaattctacctgacagaagatgtt
gtctcagattacattaaatcacagccagtcaaagatttaccaggtgtaggttattctacg
actaggagatttgaggctatgaaagtagttacatgtgatgacttgcagaaagttgctcta
gatactcttcagaaggagtttggtccaaaaacaggtcagtcattgtttaggtactgtaga
ggtcaggatgatcgaccaatcaaaatggagcaacagaggaagtctgtctcagctgaagtg
aattatgggatcaggtttgacacagattgtgaagcgactaagttcatggaggagttgtca
gaggaagtatgtaacaggttgaagggtatacatatgaagggtaaaacaattacattgaaa
ctaatggtgaggagagaagatgctccaaaacatacttccaagttcatgggtcatggtata
tgtaacaacttttctaaatcagtcactctacctatggcaacagatgatacaaaaatagtt
gccaaggaaactataggtttactgaggtctcataaagtggatgctgcagatcttagaggg
attggaatacaagtaaacaaacttgaacctgctgaagttggttgtactggtaataacaag
aaaattccgagtattcttaactttactgtaaaatcaaacagccctaacaaaacaaccaaa
caacagtcaaatgctgcagaaacagtaggagataaactgggggtaaatgtagaaactaga
catacagaaataagaaggaaacatggtacacctagtaaacttgtaacagataaacggatg
ctgtcttgtgataaaaatgcagttagtgaagcaggtaatgagataatggatacaaacaag
atgtctgagaatacagagagtactgaagctgaagttatagaccttgtacaatctgaggta
gagtccagattacctgcctcaagtgaccaggacttactgcaagatttagtcagtagacag
agagtagatgtatcgttaccaccattaccctgcctaccagatattagaactccagatagt
ggaaggaaaactaggaaatgtcacaccccagagatagagccacacccaccttcagatatt
gattacttcccatcaccttcacagattgacccagatgttttatgtgaacttccctctgaa
ataagagagcaaattgagagagaagtgaaacaaagaagagcggggccagtaagaaggaac
atgaggacatctcaatctacagatgctagttgttcccattggcaacaacagactaacaat
agatcagaacacagtcacagtgaggtagatggacatgctcaggatgtcatagttgcttta
ccctcgccgtctcagatagatttaagttgtctggaagcattaccagaaaatctgcaggca
gaactgagacaagcttatgctagacagaattctaaactgacaacaaagggaggtaacaca
ttgcaattgaaacaggcaaagtctcctgccaagtcaccaaataagaggtcacctggtaaa
agcagtccaaattttaaaataccaagaggcaagccaagtggaaggggacgtaaaaagggg
acttccaagaaaactctttttaaggatcaagctagggcagtgcaacagcagtcatcaagt
cacctgagtgtgtcagaaagtttaaacagtgctagagaaacaaccagtacaacagctagc
aatggtgttggtgatataacttctagttcatcacatgtacaatgttataataatgagaca
ctagttaatagttcttgtgtaggagatatagagggtactgaagttaattatacatcagaa
actgtgtgttgtgtaaacctttgtggtgcagtcacattacaagatgtaagacatttattg
aaggaatggatacattcaaccccagtgccacaagaagatgatgaggaaatattaaagaaa
tatatggtagatcttgtcactgataaaaatctggagcaggtagaccttctccttaagtac
atgctaaggaacatcaatagattacatgatggtgaatggctgcattcattaaagagaatt
ttcatacatacccagtcagttgtatatgatttatatggcagtcaacttgtgtctataaaa
ctgtaa

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