Ruditapes philippinarum (Manila clam): 132754155
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Entry
132754155 CDS
T09557
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1-like isoform X1
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
132754155
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rphi02000
]
132754155
Transporters [BR:
rphi02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
132754155
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
132754155
NCBI-ProteinID:
XP_060600731
LinkDB
All DBs
Position
Unknown
AA seq
652 aa
AA seq
DB search
MPKEKEVSIPSSTTSSTESVMKSEEGKVVEREGWKGTMDFILTCIGYAVGLGNIWRFPYL
CYKSGGGAFFIPYVIFLCLCGIPLFFMETVYGQFSSLSPIAIWNISPMFKGVGIGMVIVS
GLVCVYYNVIVAWTLYYLFMSFRAVLPWSTCGNWWNTDHCLDVERSVVMAGRNASHDSNS
TSLISNLTAGANYTLLGNATWLTGNTSGLIRKEDLISSSEEFWENHVLQLTDGIETLGGL
RWQLVITLALAWICVFFCLFKGVAVLGKVMHFCAPFPYLVLLVLLIRGVTLDGAIDGIKF
YIIPRWEKLATFQVWGDAALQIFYSVGMAWGGIITMASYNDFKHNVYRDAMLVPFINCGT
SIFAGFVIFSILGFMAHETGKSVEDVVTQGPGLTFVAYPEAVSMLPISPLWSVLFFLMLF
IIGLDSQFGMFETCLSAFMDEFPKTLRKRRVLVSAIACFIEFLLGLPLITEGGIYVLQII
DWYCASFSLMLISFTECVAIGWVYGVDRFYRDIELMIGYQPNGMWKVAWKYVTPLVILFV
WLFSIITLGPVTYGGKAYPEWAVTFGWCLGSVSIIPIPACAIYQLLKADGTFMERLRKIT
TPSKKWGPRKDEHRQEYLESLEADKVLQTLPMYQTRTVKRNVAEPEAKSFLS
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaagaaaaagaagtaagtatacccagttccacaactagtagcacagaatcagtg
atgaaatctgaagaaggcaaagttgttgagcgggagggatggaagggtacgatggacttt
atcctcacctgcatcgggtatgccgtgggtctcggcaatatctggagatttccgtacctg
tgttacaagagtggtggaggtgcatttttcataccgtatgtgattttcctctgtctctgt
ggtatcccgctgtttttcatggagacagtgtatggccagttttccagcttgagtccaatt
gctatctggaatatcagtcccatgtttaaaggtgtgggcattggtatggtgattgtatca
ggacttgtttgtgtttactacaatgtgatagttgcctggacactttactatctgttcatg
tcgttccgcgccgtgttaccgtggagcacctgcggtaattggtggaacactgatcattgc
cttgatgtagagaggtctgtggtgatggccggccgtaacgccagtcacgactcaaactca
acaagtctcatatcaaaccttacagctggggccaattatacgttgctaggcaacgctacc
tggctaacagggaacaccagtggcctgatacgtaaagaggatttgatctcatccagtgaa
gaattttgggagaatcatgttttacagttaacggatggtattgagactttaggtggtctg
cgctggcagctggtcatcactctcgccctggcttggatctgcgtctttttctgcttgttt
aaaggtgttgccgtcctcggaaaggtaatgcatttttgcgctcctttcccatatttggtg
ttattggtactgttgatccgtggagtgacgctagatggcgctattgatggaatcaagttt
tacatcataccacgatgggagaaactcgccactttccaggtctggggagacgctgctttg
cagattttctacagcgttggaatggcatggggtggtattatcacaatggcatcgtacaat
gacttcaaacacaatgtttacagggatgctatgttggtgccgtttattaactgcggaaca
agtatctttgctggttttgtgattttctctatcctcgggtttatggcacacgaaactgga
aaatctgtagaagatgtggtaacacaaggtccagggttgacttttgttgcgtaccctgaa
gccgtgtcaatgttaccgatctcgccactgtggtcggtgctgttcttcctcatgttgttt
atcattggtttggacagtcagtttggaatgtttgaaacatgtttaagtgcatttatggat
gagttcccgaaaactctacgaaagcgacgtgtcttggtttcagccatagcatgcttcata
gaattcctcctaggtctaccgcttatcacagagggaggaatctacgtgctacagatcatc
gattggtattgtgcaagcttctccttgatgttgatttcatttacggaatgtgttgccatc
ggatgggtttatggagtggataggttctacagggatatagagttaatgattggataccaa
cccaatggtatgtggaaggttgcttggaaatatgttacacccttggtcatattgttcgtc
tggttgttcagtataataactcttggtccagttacgtacggaggtaaggcttatcctgaa
tgggcggtgacatttggctggtgtcttggcagtgtatctattataccaatcccagcttgc
gctatttatcaactgctcaaagcagacggcacatttatggagcgtttacgtaaaataaca
acaccgtcaaagaaatggggtccaaggaaggatgagcatcgtcaggaatatttggaatcg
ttagaggccgacaaagtactacaaacattacctatgtatcagacaagaactgtcaaacga
aatgttgctgaaccagaggcaaaatcatttttgtcctga
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