Ruditapes philippinarum (Manila clam): 132754239
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Entry
132754239 CDS
T09557
Name
(RefSeq) enhancer of split mdelta protein-like
KO
K06055
hairy and enhancer of split 5
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
132754239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rphi03000
]
132754239
Transcription factors [BR:
rphi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
132754239
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_IRO3
Hairy_orange
bHLH_NPAS4
TRI-like_N
Motif
Other DBs
NCBI-GeneID:
132754239
NCBI-ProteinID:
XP_060600839
LinkDB
All DBs
Position
Unknown
AA seq
246 aa
AA seq
DB search
MVGSCTRESSDSFSLRKLRKPLIEKKRRDRMNVSIDSLKALLAKSSNNPATVVKMDKAEI
LELAVTRLSQLHQQPKTTNTDHVTSYRAGYRECRKQTVLYLSSAVMMPNSLLLDIDNHLH
NVCDTSGQDDVIVSSATRKTSFIPERRRTNSPALDLPPAPTYGSFCPDSMFSPIASAEIR
GHRVHSPMDISYVSRCDSPFSMTASSGSSASGISENSSDSEVFAHAQPTHHKSEIAVGQE
TPWRPW
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atggttggatcttgtacacgtgaatcgtcggattctttttccctaagaaagttacgtaaa
cctctgatagagaagaaacgacgagatcgtatgaatgtcagtatagatagcctgaaagcc
ttgttggcaaaatcttctaacaacccagcaaccgtggtaaagatggacaaggccgagatt
ttagaactggctgtcactcgcctttcgcagcttcaccaacaacccaagaccacaaatact
gatcacgtgacatcttaccgcgcggggtaccgggaatgcaggaaacagactgtcctatac
ctaagctcagctgtcatgatgccaaattctcttcttttagatattgacaaccatctacat
aacgtatgtgatacttccggtcaagatgacgtcattgtgtcgtctgctacaagaaagacc
agttttattcctgaacgcagacgtacaaattccccagctttagacctaccaccagcacca
acctacggttcattttgtccggacagtatgttttcccctattgcttctgctgagatcaga
ggtcatcgagtgcattcacctatggatatttcatatgtaagcagatgtgattctccgttc
agcatgaccgcttcctctggttccagtgcttcaggaatttctgagaactcgtcagactct
gaagtttttgcgcatgcgcaaccaactcatcataaaagtgaaattgctgttggccaagaa
acaccatggagaccttggtaa
DBGET
integrated database retrieval system
