Ruditapes philippinarum (Manila clam): 132754341
Help
Entry
132754341 CDS
T09557
Name
(RefSeq) integrin alpha-2-like
KO
K06483
integrin alpha 4
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi04512
ECM-receptor interaction
rphi04517
IgSF CAM signaling
rphi04518
Integrin signaling
rphi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132754341
04517 IgSF CAM signaling
132754341
04518 Integrin signaling
132754341
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
132754341
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rphi04147
]
132754341
04515 Cell adhesion molecules [BR:
rphi04515
]
132754341
04090 CD molecules [BR:
rphi04090
]
132754341
Exosome [BR:
rphi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132754341
Exosomal proteins of other cancer cells
132754341
Cell adhesion molecules [BR:
rphi04515
]
Integrins
Integrin alpha subunits
132754341
CD molecules [BR:
rphi04090
]
Proteins
132754341
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_3
FG-GAP_2
FG-GAP_3
ITGAX-like_Ig_3
Integrin_alpha
Collectrin
Insulin_TMD
Vps3844_C
Motif
Other DBs
NCBI-GeneID:
132754341
NCBI-ProteinID:
XP_060600943
LinkDB
All DBs
Position
Unknown
AA seq
1096 aa
AA seq
DB search
MMKSDSIQTHVLCTRVKYICASVLFFLLCLDGVLTFNVDTKNVKVFQGPAGIYFGYSLAM
LRNVQGNWLLVGAPRANDPLQPGITSPGVLLRCPLDGDSVRCDEVVVDTSGNVRVAGTFY
GVTKVFDHDKNNQWLGVSVDVSPNNDRVAVCAHRWKDSKFVLPNDLLYMQGLCYELDAGF
QLPARLLPVLVDYNSLVHRQERYPIWAYGALGQSVEYTKNGDALLMGAPGLNDWQGGFVI
EDNMRRNFTVQPLSDDRRNWLIGYTVTSARLIRTNANYIIAGAPRANLNGSVFVFEYKSD
QILNEPLIGDQLGSYFGSVLCAADVNNDQLDDVIVGAPFYSTNNTEEGRVYVYINRGMLK
LELQEDRINGSTLNQARFGSAIANIGDINKDGYNDIAIGAPYEADGVGAVYIYNGYSGGL
WPRYTQRILGTTISPGIKSFGAALTPRSVDEGEVFAVGAYETDNVAILRVNPVVSMETIM
YVRPTIITASMPYLDLSTCFKYTGNAANLQSTLDITYTMLADTTTPAGSVRAIFEPNKVP
YITRDLQITKDEFVCDNNVRIYAPYQDIWRDVDVEVRYGLDPATARQCVRNCPILERFNG
KDPERSAQDVFRKVIQYDKQCGEDNKCDTGLQLKVLPLTESGYIVTGRDQSVDVKVGLLN
NGENAYNIIMDVVMLGNFSSTIRTKDTFGETIVDCALLQYDNSDPALEVATHRCRVRKPY
PLTTMEEVTFTLEIPLDSKAKMAEFEANFTVRTEEQDNHQASQALKLPVKSEYGLRIEGI
SGPEQVTLSVQQTSEEFTPVEHRYSIKNFGPSPLENAEIHAFVPAIIHRKDPLVTNISVW
LTTYETNQPSKQRCYEDNGGGNIPNTESSGGYAISVDCSSFPCRRFSCNLLSFKKDESIL
VSVNVSVSRQILSRLQAKDTVRLASRISIPDVNFGKSLDKEVETMFHKTTNAMERKRVSI
PIWLIIVSVVSAFLVLLVIVAILIKVGFFKRSKKEEMKRLMRRNSSPFSDTNTSNDTSAR
VNGTSDSSRIMSSIEDNDLSRADEAHINPATDPDNIDQLDGMPSKEKHSNFLNELQSASN
RPFYKTDSSLDSGYKS
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaatcggattctattcaaacacatgtattgtgtacgcgtgttaaatatatatgt
gctagtgttttattcttcctgctttgtttggacggggtgttgacgtttaacgtggatacc
aaaaatgttaaagttttccaaggacctgctggaatatattttggatattcgttagctatg
ctgcgtaatgtacagggcaactggctacttgttggagcaccaagagcaaatgatccactc
cagccaggaattaccagtcctggtgttctcctcagatgtccgctagatggcgacagtgtc
agatgtgacgaagttgttgtggatacttcaggaaatgtaagagtagcagggacattttat
ggcgtaaccaaagtgtttgaccacgacaaaaataaccagtggctgggcgtgtcagtagat
gtatccccaaataatgacagagttgccgtatgtgcgcatagatggaaagattcaaagttt
gttctgccaaatgacttactgtacatgcaaggattgtgttacgaattagacgctggattt
caacttccggcaagactacttccggttttagttgattacaacagtctcgtgcatcggcag
gaacgctatccaatctgggcttacggggcacttggacagtctgttgaatataccaagaat
ggcgatgctctgctgatgggagctccagggttaaatgactggcagggaggatttgttata
gaagataatatgcgaaggaattttacagtgcaacctttatctgatgaccgtagaaactgg
ctcataggttacactgtgacgtcagcccgcttgataagaacaaatgccaattacatcata
gctggtgcgccaagagccaacctcaacggatctgtttttgtgtttgagtacaagagtgat
cagatcttgaacgaaccactgattggcgatcagttagggagttattttggatcagtatta
tgtgcagctgacgtcaacaatgaccagttagatgacgtcattgtcggtgcgccgttctac
tcgaccaacaatacagaagaaggcagagtttatgtttacataaatcggggaatgttaaaa
ctagagttacaagaagataggataaatggatcaacattgaaccaggccaggtttggtagt
gcaatagcaaatattggtgatattaataaagacggttataatgacatagccattggcgcc
ccatacgaggctgacggcgtcggtgcagtgtatatatataatggatacagcgggggtcta
tggcctagatatacgcaaagaattctgggtacaactatatcgccgggaattaagtcgttt
ggagcggcattgacccctagatcggtcgacgaaggtgaagtctttgctgttggcgcctat
gagacggacaatgttgccattttgagggttaatccagtcgtatccatggaaacaataatg
tatgttagaccaacaattataacagcctctatgccatatttggatttgagcacttgcttt
aaatatacaggcaatgcagcaaatttgcaatcaactttagatattacatacacaatgtta
gcagatacgacaactcccgcagggtctgtgagggcaatatttgagccaaacaaagtgcca
tacattacaagagatctacagataacgaaagatgaatttgtttgtgacaataatgttaga
atctatgctccgtatcaggatatttggcgtgatgtagacgttgaggtcagatatgggctt
gaccctgccacagcgaggcaatgtgttcgcaactgtccaatcttggagaggtttaatggg
aaagaccctgaaaggagtgcgcaggatgtgtttagaaaagtgatacaatatgacaagcaa
tgtggcgaggataacaagtgtgacactgggctacagttgaaagtacttccactcacggag
agtgggtatatcgtcactgggcgtgaccagagcgtcgacgtaaaagttggcctcttaaac
aacggggagaatgcgtacaatataataatggacgtggtgatgttaggcaacttctcctcc
actatcagaacaaaagacacatttggggagacaattgttgactgcgcactgctacagtac
gacaacagcgatcctgcattagaagttgccacgcatcgttgccgtgtccgtaaaccgtat
cccctaacaaccatggaggaagtgaccttcaccttggagattccattagacagcaaggct
aaaatggccgaatttgaggccaatttcactgtacgaactgaagaacaagataatcaccag
gcctcccaggctctgaaactacctgtgaaatccgaatatggtcttcggatagagggaatt
tccggaccggaacaagtcacactgagtgtacagcaaacgtctgaggaattcacgccagta
gaacatagatactccatcaagaactttggaccgagcccgctagaaaatgccgagatccat
gccttcgttcctgctatcatacatagaaaagatccactagtcactaatatttccgtctgg
ctgacaacatacgagacaaatcaaccatctaaacagcgatgctacgaagataacggaggt
ggtaacattcctaatacagaatcatccgggggatatgctatcagtgtggactgctcatct
tttccatgccgccgattttcttgtaacctgctttcattcaaaaaagacgaatctatccta
gtttctgttaatgtttccgtcagccgacaaattctttcccggttgcaggcaaaagataca
gtgagactcgcatcacgaatttcaataccggatgttaattttggaaagtctctcgacaag
gaggttgagacaatgtttcacaagacaaccaacgcaatggagagaaagagggtctctatc
ccgatatggttgattatagtatccgtcgtgtcggcattcctggtgctgctggtaatcgtg
gctattctgataaaggtcggatttttcaaacgatcgaagaaagaagaaatgaagcggcta
atgcgtcgaaattcttcgccgttctcggatacaaacacgtcaaatgacacgtcagcacga
gttaacggaacctccgacagctcgcgtatcatgagctcgatagaggacaacgatttgtcc
cgggcagacgaggcacacattaatccggccacagatccggacaatattgatcaacttgac
ggcatgccttctaaggagaagcactccaactttttaaatgaactacaaagtgcttcaaat
cggccattctataaaacagactcgagtttggactctggctacaaatcataa
DBGET
integrated database retrieval system
