Ruditapes philippinarum (Manila clam): 132754556
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Entry
132754556 CDS
T09557
Name
(RefSeq) patched domain-containing protein 3-like
KO
K24682
patched domain-containing protein
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rphi04990
]
132754556
Domain-containing proteins not elsewhere classified [BR:
rphi04990
]
Other domain-containing proteins
Patched domain-containing proteins
132754556
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sterol-sensing
Patched
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
132754556
NCBI-ProteinID:
XP_060601179
LinkDB
All DBs
Position
Unknown
AA seq
892 aa
AA seq
DB search
MTSCFEKFYNVVEEKMGSVFTKYGKFVSRHPWKVILVTVLVNGLLGLGMIRLNVVVDVER
VYTPIGSQASKDSTKVKNLFPDLSGSNFIGYQMPDMGKYAEIIVIPNGGNILNERFLKAL
QVFHTFLLSIETNDINGNTVKLSDICAISFGKCVIDGDLFVDNQFINILNTSNAISFPYF
NHTVRGPIYYEQNVGGAIVNSSQLQLASMLLLRVNLRTDSSYFTETAKKWQKNFVSKMKV
YSSSDFNIAFAHSESLSEELNENVMGDITVFSITFTLMITYACVATLTARCDVVGQRSNL
GFAGVVAAGLAIVAAFGLCSACGVEFVSIVGVIPFLIIGIGVDDMFMLISGITNTDYSSS
TEDRIGETMKTSGISITITSLTDLLAFAAGASSVFLSVRNFCIYAGVAVIFCYINQATIF
LASIVINENRTNNNRHFLTCMRVNSPDKDSTKETSCKIVCCTGRKPNNSKESESFLDKFP
GWILPKIISIPAKIIILILFAIYLSVSIWGITLMKEGLEMRNLVSQTSYYYEYRKLLDEK
FPLGTPVSFVFNKPLKYSDLNVQQKVNDILSLVKSEQTVLDSVEVNWLSEYKADKSNFNA
SSEIEFIKGFQGFLNNSSNTRFRNDVVIDKNNISIVASRVHVMSKSIKDSQAQGKFMERM
RELSSDRTDLPVFAFSPAFLFYEQYVVILTQTIQTLGIAVAMVFFITFIFMPHPLLLLYI
TTTVAMITVGIFASLPFLDLTLSSITMIHIIMSIGFSVDFAAHICHGYMISEGPDRNERM
KSGLKRSGTPIFHGAISSILGVIVLAAAKSYIFFSFFKVMIVVITVGIMHALFLLPVILS
LIGPPISNATVSPKNETRSPTDNHKWQDIALASNVHIPRAHTGKITEREKIT
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgacaagctgtttcgaaaagttctacaatgtggttgaagagaaaatgggatctgtgttt
acaaagtatgggaaattcgtttcacggcatccgtggaaagttatcctagtgactgttcta
gtgaatggccttcttggattgggaatgatccgactaaatgttgtcgtagatgttgaacgt
gtctacacaccaatcggaagtcaagcgagtaaagacagcaccaaagtaaaaaatttattt
cctgatttgagtggttcgaactttataggttatcaaatgcctgatatgggcaaatatgct
gaaataatagttataccgaacggaggaaatatcctgaatgaacgatttctaaaagcattg
caagttttccatacatttttactttctattgaaacaaatgatatcaatggaaacactgtt
aaactaagtgacatttgtgctataagttttggaaaatgtgtaattgacggagatcttttt
gttgacaatcaattcattaatattctaaatacaagtaatgcaatttcttttccgtatttt
aatcacactgtaagagggcccatttactacgagcagaatgttggtggtgcaattgtcaac
tcctcccagcttcaattagccagtatgcttttattgagagtaaatctcagaactgattcg
tcgtactttactgaaacagctaaaaaatggcaaaagaattttgtttcaaagatgaaagtc
tattcttcaagtgactttaatatcgcctttgcccattccgagtctttgagtgaagaactt
aatgaaaacgttatgggtgatatcacagtattttcaataacatttactttaatgataacc
tatgcctgtgtagcaacactaacagctcgttgtgatgttgtcggccaaaggtcaaacttg
ggtttcgcaggagtagtagccgctggcttagctatcgtagcagcatttggattatgcagt
gcatgtggagtcgaatttgtcagtattgttggggttattccatttttaatcataggtata
ggagtagacgatatgtttatgttaatatccggaatcacaaacacggactattcatcatca
accgaagatcgtattggtgaaactatgaaaacgagtggtatttcaatcacaattacttct
ctgacagacctgttggcatttgcagctggggcttcttcagtatttctaagcgtgcggaac
ttttgtatttatgccggtgttgccgttattttctgctatataaatcaagcgaccatcttt
cttgctagtatagtcatcaacgaaaacagaacaaacaacaaccggcactttttgacatgc
atgagagtaaacagtcctgataaagacagcacaaaagaaacttcttgcaaaatcgtttgt
tgtacaggcagaaaaccaaacaattcgaaagaatctgagagctttttagataaatttccc
ggctggattttaccaaagataatatcgatcccagctaaaattataattcttattttgttt
gctatctatttatcagtatctatttggggtataactctcatgaaggaggggctagaaatg
cgaaatcttgtatcacaaacgtcatactattatgaatatagaaaactactagatgaaaaa
tttccactaggaacacctgtttcctttgtttttaacaaacctttgaagtattctgactta
aacgtgcagcaaaaagtaaacgatatattgtctttagtgaaatcagagcagacagttctt
gattctgtagaggtaaactggctttcagaatataaagctgacaaatcaaattttaatgcc
tcgtcagaaattgagtttattaaaggttttcaagggtttctgaataatagtagtaatacg
cgttttcgcaatgacgttgtcatcgacaagaataatatctctatcgttgcgtctcgtgtc
catgttatgtcgaaaagcattaaagactcccaggcccaaggaaagttcatggaacgtatg
agggagctgtcatcagaccgaacagacctaccagtctttgccttttcaccagcctttctg
ttttacgaacaatatgtcgtaattttaactcagacaattcagacacttggtatagctgtt
gctatggttttcttcataacattcatattcatgccacacccactacttcttttgtacatc
acaacaactgttgccatgatcactgttggaatctttgcatctcttccgtttttagatttg
actctaagttctataacaatgatccatatcattatgagtattggcttttccgttgacttt
gcggctcacatatgtcatggttatatgatatcggaaggccctgataggaacgaacgcatg
aaatctggcttgaaaaggtcaggaactccaatatttcatggagctatttcttctatttta
ggagttatcgttttggcagccgcaaagtcttatatattcttttcgttcttcaaagtcatg
attgttgttattactgttggaattatgcatgccctttttctattacctgtgatactttct
ctcattggacctccaatttcgaacgcaacggtttccccaaaaaatgaaacgcgttctcct
actgataatcataaatggcaggacattgctttagcaagtaacgtacatataccgcgtgca
catactggcaagattacagaaagggagaaaataacgtga
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