Ruditapes philippinarum (Manila clam): 132754749
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Entry
132754749 CDS
T09557
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-7-like
KO
K16498
protocadherin delta 1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
132754749
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rphi01009
]
132754749
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rphi04515
]
132754749
Protein phosphatases and associated proteins [BR:
rphi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132754749
Cell adhesion molecules [BR:
rphi04515
]
Cadherins
Protocadherins
132754749
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Motif
Other DBs
NCBI-GeneID:
132754749
NCBI-ProteinID:
XP_060601419
LinkDB
All DBs
Position
Unknown
AA seq
682 aa
AA seq
DB search
FEIISVKVVINDLNDNSPTFPHNTQAIAISEAAAKGSSYMIENAVDHDKGANNSIQYYEF
VGDKNVFDLRVERKLDESFSVKLLVIYKMKSPFLLQHFLYVTVKEDTRDGSGILQISATD
KDINENSWLLYRLSPRQSDLEEIKSLFYINEHTGVLSIIGQLVYDPKKVYKIIVEAVDRG
KPSLPSTNQAEVTVYIKDTGNNPPTVQINLISSGTGRMVNVSEFSSKGTFVAHVEVKDKD
TGQNGDVSCSVDDAFFALEPLSNKGYKVVVAKTLDSEKQDLHTVVVTCEDKGSPVLSSSD
SFLVRVTDENDMVPKFTKKNYFEDFYENNERGDLVISVRATDDDKSNTNNSKIEYYLDPM
MKDYFTIDSSTGTIRALVPFDREERSIWTFKVFARDFGNPRLTGNATVNVRIKDENDNAP
KFTNTTFIFYVQENLPSGSVADRLTAKDYDADENGMFTYAISNTKETKLPFLLFPDGVIK
TTMELDREAKSSYEFLVIAIDKGIPKRTSSAKVIIKVSDVNDESRKIVFPKKKTSMTLLL
CNNTPVSSGPNTNIIIVVVVIFLTFFLSLAIIIVICVIRKFDRDRLKTQNIQINKLPNNM
TEIRDNTANGVIMTRPYDKVDSLKKRKEVSFSFEDDLDCMQDHELTFSNNSAFNEPVTEV
TPLYSFKPFVKAKQNYMIPCER
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
tttgagattatttctgtgaaagttgtaattaatgatttgaatgataattccccgacgttt
ccccacaatacgcaggctatagctatatcagaggcggcagccaaaggttcatcatatatg
attgaaaatgcagtagatcatgacaaaggtgcaaataattctatacagtattatgaattt
gttggagacaaaaatgtttttgacttgcgtgttgaacgtaaacttgatgagagtttctca
gtaaaacttcttgttatctacaaaatgaaatctccgtttttgctgcaacacttcctatat
gttacagtaaaggaagatacccgtgatggctctggtatcctgcagatcagtgccacggac
aaggatattaatgaaaacagttggttactttaccgtcttagtccacggcaatcagatctc
gaagaaattaaatctctcttttatataaatgaacacactggagtactaagtataatcggt
cagttagtgtatgaccccaaaaaagtttacaaaataattgttgaagccgtagatagaggt
aaaccatcattaccgtccaccaatcaggcggaggtcaccgtttatatcaaagatacagga
aacaatccaccaactgtgcaaattaaccttatatctagtggcactggacgtatggttaac
gtatctgaattctcctcaaaaggaacttttgttgcccatgttgaagtaaaagataaagac
accggacaaaatggtgatgttagttgttctgttgatgatgcctttttcgctcttgaacca
ttatcaaataaaggatataaagttgttgttgctaaaacattggatagtgaaaaacaagat
ctacatactgttgttgtcacatgtgaagacaaaggtagtcctgttcttagttcttccgat
agttttcttgtgcgtgtaactgacgaaaatgatatggtaccaaagtttacaaagaaaaat
tattttgaagatttctatgaaaacaatgagagaggtgatttagtaatttctgtgagagca
acagatgatgacaaaagtaatacaaataattctaaaattgaatattatttagatccaatg
atgaaggattatttcacaattgattcaagcaccgggactattagagctttggtccctttt
gatcgtgaagaaagaagtatctggacatttaaagttttcgccagagattttggaaatcca
cgtctaactggaaatgccactgttaatgttagaattaaagatgaaaatgacaatgctcca
aagtttacaaatacaacttttatcttttatgttcaagaaaatcttccatcaggtagtgta
gccgataggttgacagcgaaggattacgacgctgatgaaaatggaatgtttacatatgca
atctcgaatacaaaagaaacaaaacttccatttttactgtttcctgatggagttataaaa
accacaatggaattagatagagaagctaaaagctcatatgaatttcttgttattgctata
gataaaggaattccaaaaagaacaagtagtgctaaagtaattataaaagtttctgacgtt
aatgatgaatcccgaaaaattgtcttccctaaaaaaaagacgtcaatgacactattattg
tgtaacaacacaccggttagttctggtccaaacactaatatcattatagtagtggtggtt
attttcttaacgttctttttatcgttggcaataataatcgtgatatgtgtcataagaaag
tttgatagagatagattgaaaactcagaatattcaaataaacaagcttcctaataacatg
actgagattcgagacaatacggccaatggtgtgatcatgacacgtccatatgataaagtc
gactccctgaaaaagaggaaagaagttagtttttcatttgaagatgatttagactgcatg
caagatcatgaattgactttctccaacaattcagcgttcaatgagccagtcaccgaggta
actccattatatagttttaaaccatttgttaaggctaaacaaaattatatgattccttgt
gaaagataa
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