Ruditapes philippinarum (Manila clam): 132754773
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Entry
132754773 CDS
T09557
Name
(RefSeq) DNA mismatch repair protein Mlh1-like
KO
K08734
DNA mismatch repair protein MLH1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03430
Mismatch repair
rphi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
132754773
03460 Fanconi anemia pathway
132754773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rphi03400
]
132754773
DNA repair and recombination proteins [BR:
rphi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
132754773
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
132754773
NCBI-ProteinID:
XP_060601444
LinkDB
All DBs
Position
Unknown
AA seq
714 aa
AA seq
DB search
MNVRKSLQCSAGVIRRLDEVVVNRIAAGEVIQRPANALKEMIENSLDAKSTNITVTVKQG
GLKLLQIQDNGSGIKKDDMNIVCERFTTSKLSKFEDLNSIATYGFRGEALASISHVAHVT
IVTRTADSKCAYRGSYIDGKLKEAVKPCAGNVGTQITVEDVFYNISTRRKALKSPAEEHA
KIVEVVSRYAVHNCKVGFTLKKHGEGMADVRTPSNSTYTDNIRTIFGPAVARELLEVEHT
DEKLSYKLHGFVTNANYNVKKGTFLLFINHRLVESSSLKKAIDLVYQAYLPKHTHPFLYL
SLEIAPQNIDVNVHPTKHEVRFLHEDAIIESVQKTIETKLLGCNVSRTYYTQALLPGATV
IPELSKEDANKDTDSGNKTYAHQMVRTDSREQKLDAFFKPPNQNAENEKEANQSTNQIQS
SSTDSTEAPMETEMTSTSSSDKSKINLPQCGSQPKRRDIKLASVLDLQKQIKENLHSGLR
EMFSNHVFVGCVDKEFSLMQHQTKLLLTNTSKLSEELFYQLFIFDFGNFGLLRLSEPAPI
YDLAMMALDLEESGWTDADGPKEDLAEYIVNFLKSKSEMLQDYFSIEIDQKGYLHTLPLV
LDDYIPDLEGLPMLVLRLATEVDWDAEKECFESFSREMSSFYAIKKSLFASTDENSEQKP
ENDPKNRSSWKWTVEHVIFPGLRNLFYPPKHFAEDSSVLQIANLPDLYKVFERC
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtcagaaaatccttgcaatgttctgctggggtgatcagaaggttagatgaagtt
gtggtcaatcgtatagctgcaggggaagtaattcaaaggccagcaaatgctctcaaagaa
atgatagaaaacagccttgatgctaaatctacgaatataacagtgactgttaaacaaggt
ggtctcaaactgttacagatacaggacaatggttcaggaatcaagaaagatgacatgaat
atagtgtgtgagagattcactaccagcaaattatcaaaatttgaagatttgaattccata
gcaacatatggtttccgtggtgaggcattggcaagtatcagccatgttgctcatgttact
atagtaacaagaactgcagattctaaatgtgcttacagaggtagctatattgatggtaag
ctgaaggaagcagttaaaccatgtgctggtaatgtaggaactcaaattactgttgaagat
gtattttataacatatctactagaaggaaagcattgaagagtccagctgaagagcatgcc
aagattgtggaagttgttagcaggtatgcagtgcacaattgtaaagttgggtttacttta
aagaagcatggagaaggaatggctgatgtaaggacgccaagtaattctacatacacagac
aatataaggaccatcttcggaccagctgtagcaagggaactattagaagtggagcataca
gatgagaagttgtcctataaattacatggatttgttaccaatgctaactacaatgttaag
aaaggaacatttctactgtttataaatcatagactggtggagtctagctcactaaagaag
gcaatagatttagtgtaccaggcctatcttcctaaacatacacatccattcctttatctc
agtttagagattgctcctcaaaatattgatgttaacgttcatccaacaaagcatgaagtt
cgcttcctacatgaggatgctatcatcgagagtgttcagaagacaatcgagacaaagttg
cttggttgtaatgtcagccggacctactacactcaggcgttgttaccaggggcaacagtg
ataccagaactctcaaaggaagatgctaacaaagacacagattctggaaacaaaacgtat
gcccaccagatggttcgtacagacagcagagaacagaagcttgatgcatttttcaagcca
cccaatcagaatgctgaaaatgaaaaagaggctaatcaatcaaccaatcagattcagtct
tcttcaactgattcaacggaagcaccaatggaaacagagatgacatctacttctagctca
gataaaagtaagataaatctaccacagtgtggaagtcagccaaaaagacgtgatataaag
ttggctagtgtccttgacctacagaaacaaataaaagaaaatttacattcaggtttacga
gagatgttttccaatcatgtttttgttggctgtgttgacaaagaattctccctcatgcaa
catcaaacaaaacttcttcttacaaatacaagcaaacttagtgaggaactgttttatcaa
ctgtttatctttgattttggaaactttggtcttctcaggttatcagaaccagcccccata
tatgaccttgccatgatggcccttgaccttgaagaatcagggtggactgatgcagatgga
ccaaaagaggaccttgcggaatatattgttaattttttgaagtcaaaatcagagatgctt
caagattatttctctatagaaattgatcagaaaggatatcttcacactttacccctggtg
cttgatgattatatacctgacctagagggactgcctatgttggttttgagacttgcaact
gaggtggactgggacgcagagaaagaatgttttgaaagtttttctcgggaaatgagcagt
ttttatgccataaagaaaagtttatttgccagtacagatgaaaactctgaacaaaagcca
gagaatgatccaaagaacagatcatcttggaaatggacggtggagcatgttatatttcct
ggtttgaggaatctcttttaccctcccaaacattttgcagaggactctagtgtgttacag
attgctaacctgcctgatttatataaagtttttgaaagatgctga
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