KEGG   Ruditapes philippinarum (Manila clam): 132754776
Entry
132754776         CDS       T09557                                 
Name
(RefSeq) LOW QUALITY PROTEIN: histone deacetylase 4-like
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
rphi  Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rphi03036]
    132754776
Enzymes [BR:rphi01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     132754776
Chromosome and associated proteins [BR:rphi03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     132754776
SSDB
Motif
Pfam: Hist_deacetyl HDAC4_Gln TFIIA
Other DBs
NCBI-GeneID: 132754776
NCBI-ProteinID: XP_060601448
LinkDB
Position
Unknown
AA seq 1041 aa
PLGPSDPAMEMNSHYINRKDIVTSPLSSPTLDRRGQGSNMYSEPHMQPAHVQQQILTLKQ
QQQLQQQMLLQQFQQQQQQLAQEHEKQLQDYHKFQQEQLAKEHDRQMQEHFKQLVLIQKQ
QEYLAEQQKLEERQRIEKEIHEKTRLSQIKNKNKEEESAVASTEVKQRLQDFVLSKKQRE
AAVRNSPPQFRHWPLDQNSPPTTGLSPPYSHTLLGKYDDDFPLRKTASEPNLKVRSALKQ
KVMERRITQSPILRRRDKGFLFKRKTPLSIDCGSNSDSGPNSPPGGVHPALSNGNLKEDT
HIHPYLLYHTMGYVNPDLYTSPSMPNISLGRPPSAGGNGTHSNYSEAELRAMGAARLGLP
LSGQGLPGITGYHPSLPAIDGEYPSPSDTSARSMMAAQLKAIEEARASGTKPSPLVGPPY
PTPTSKQSSSESHQARIHRHRPLGRTQSAPLPIGHPFIQQNLLLQQQQQRAGVAGPGIEH
DPEQILKDKFLVKQHIRQTVLQRTSSKSHMENVDEETEAKLAQEMKEAHEADDNDVIVVK
ETKMDDGRLEISNKLTRRESEHLLAVTKPRHKGHHRPLARTQSSPLVTFSMPPQAQEVGP
VKYSFTTAIAYDTMMQKHQCSCGSDSVHPEHAGRIHNIWSRLQEKNLISSCEQLKCRKAT
LEEIQSCHSEAYTLFYATNHLSRSRLDPKHFENLPMRFCALPCGGVGVDSDTVWNDLHTS
IAARMAAGCVSEMAYRVGSGELKNGFALVRPPGHHAEPEQAMGFCYFNSVAIAAKQMRDK
LKMKERKIFYFFXLDWDVHHGNGTQQMTFNDKEILYISIHRHDNGNFFPGTGAPEECGAG
EGVGFNVNVAFSGGLEPPKGDAEYLAAFRTIIMPIAREFNPEIVLVSAGFDAAAGHPAPL
GGYMVSPQCFGHMTRELMSLANGKIVLALEGGYEITAICDSAEMCLKALLGQEIPPIKEE
ELCKVPCKTAIETLENTINIQGKHWPCLQRYLGTIQYSIIEAQKRESEETDTVTALASLS
MVAAKRSESLEQEAEPMDEES
NT seq 3128 nt   +upstreamnt  +downstreamnt
agcctctagggccatcagaccctgctatggagatgaatagtcactatattaatagaaaag
atatagtgacgtctccattgagttcacctactcttgaccgtcgtggacagggttccaaca
tgtacagcgagcctcacatgcagcctgcacatgttcaacagcagattctgaccttgaaac
agcaacagcaacttcagcaacagatgttgctacaacagtttcaacagcaacaacaacaac
tggcacaagagcatgagaaacaattacaggactatcacaagtttcaacaagaacagttag
ctaaagagcatgaccgccagatgcaagaacattttaagcaactggtgttgatacagaaac
agcaagaatatcttgccgagcagcagaagcttgaggagagacagagaattgagaaggaaa
tccacgagaaaactcgactctcacagatcaagaacaaaaacaaggaggaagagagtgcag
ttgcgtcaacagaggtaaaacagaggctccaggattttgttttgtctaagaaacaacgtg
aggcggcagtgagaaatagtcccccacagtttcggcattggccattagatcagaattccc
cgcctaccacaggcttatcaccaccatacagtcataccctactcggaaaatatgatgatg
attttccgctcagaaaaacagcgtctgaaccaaatttaaaggtgcgctcggcgctaaaac
agaaggtcatggagcgacgcattacccagagtccaattctacggcggcgagataagggat
tcctatttaaacgcaaaactcctttatcaattgactgtgggagcaattctgattcgggac
cgaactctccacctggtggggttcatcctgcgctgtctaatgggaatctgaaagaagaca
cacacatacacccatatcttctgtatcacacaatgggctatgtaaacccagatttatata
catcaccgtccatgccaaacatttcattagggcgacctccaagtgctggtggtaatggaa
ctcattcgaattattcagaggcggaactgcgggcaatgggtgctgcacggttaggtctcc
cgctatctgggcagggtctgccaggcatcacaggctatcacccatcattgccagctatag
atggagaatacccgtcaccttctgatacgtcagctcgatccatgatggcagcccaactca
aggctatagaagaagcccgggcctcagggaccaaaccctcaccccttgtagggcctccct
accccacacccaccagtaaacagtcatcatcagaaagccaccaagccagaattcatagac
atcgaccattaggacgcactcagtcagctccattaccgattggtcatcctttcatccagc
agaatctattgttacaacagcagcagcagcgagctggggtcgcgggacctggcattgagc
acgaccccgagcagatcctcaaagataagttccttgttaaacaacatataagacaaactg
tattacaacgtaccagcagtaaaagtcatatggagaatgtggatgaagaaacagaggcaa
agttagcacaggagatgaaagaagcccatgaagcagacgacaatgatgtcattgttgtca
aggaaactaagatggacgacggtcgtttggagatttcaaataaactgacaagaagggaaa
gtgaacatctattggctgtaacaaagcctcgacataaagggcatcatcgtcccctggcaa
gaacccaatctagtcccctcgttactttctccatgcccccacaggcacaggaagttggcc
ctgtaaaatacagcttcactactgcaatagcatatgacactatgatgcagaagcaccagt
gttcatgtggttcagactccgtacatccggaacatgccggtagaatacacaatatttggt
cccggttacaagaaaaaaatctgatctcaagttgcgagcaactcaagtgccgaaaagcta
cattagaagaaatacagtcatgtcattcagaggcttatacattgttttatgccacaaatc
atttaagtcggtctcgacttgatcccaaacattttgaaaatctgccaatgcgtttttgtg
ctctaccttgtggtggtgttggtgtggactcggacacagtttggaatgatcttcatacat
ccattgcagcccgaatggcggcaggttgtgtttcagagatggcatacagggttggttctg
gtgaactaaagaatggctttgctcttgtacgaccacctggacatcatgccgaacccgagc
aagctatgggattctgttatttcaattctgttgctatagcagctaagcaaatgagagata
agttgaaaatgaaggaaagaaagattttttatttcttttagttagattgggatgttcatc
atggaaatggtactcaacagatgaccttcaatgataaagaaattttgtatatctcaatcc
atcgacatgacaatggcaactttttccccgggactggggcaccagaagaatgtggtgctg
gggaaggtgttgggttcaatgttaatgttgccttcagtggaggactagaacctccaaagg
gtgatgcagaatacttagctgcctttagaaccattatcatgccaatagcgagagagttta
atcctgagatagttctggtttcggctggttttgatgcagcagcaggtcatcctgccccgc
ttggtggctacatggtctcaccacagtgctttggtcacatgactagggaattgatgtcat
tggctaatgggaaaatagttttggccctggaaggaggatatgagataactgcaatttgtg
actcagcagaaatgtgcctaaaggccttgttaggtcaggaaatacctcctataaaagagg
aggagttgtgtaaagttccttgcaaaactgccattgaaaccttggagaatacaataaata
ttcaaggaaagcattggccttgtctacagcgataccttggtacaatacagtactctataa
tagaagcccagaaacgtgagagtgaagaaacagacacagttactgcccttgcttcattgt
caatggttgctgccaaaagaagtgagtcccttgaacaggaagctgagcccatggatgagg
agtcctag

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