Ruditapes philippinarum (Manila clam): 132754941
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Entry
132754941 CDS
T09557
Name
(RefSeq) ubiquitin-ribosomal protein eS31 fusion protein isoform X1
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03010
Ribosome
rphi04120
Ubiquitin mediated proteolysis
rphi04137
Mitophagy - animal
rphi04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
132754941
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132754941
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
132754941
04137 Mitophagy - animal
132754941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
rphi03011
]
132754941
04121 Ubiquitin system [BR:
rphi04121
]
132754941
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rphi04147
]
132754941
Ribosome [BR:
rphi03011
]
Ribosomal proteins
Eukaryotes
Small subunit
132754941
Archaea
132754941
Ubiquitin system [BR:
rphi04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
132754941
Exosome [BR:
rphi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132754941
Exosomal proteins of colorectal cancer cells
132754941
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
Dsc3_N
Ubiquitin_5
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
132754941
NCBI-ProteinID:
XP_060601677
LinkDB
All DBs
Position
Unknown
AA seq
163 aa
AA seq
DB search
MISEVVIMQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG
RTLSDYNIQKESTLHLVLRLRGGAKKRKKKNYTTPKKNKHKKKKVKLAVLKYYKVDENGK
ITRLRRECPNEDCGAGVFMASHFDRQYCGKCCLTYVFNKPDDK
NT seq
492 nt
NT seq
+upstream
nt +downstream
nt
atgatttcagaagtggtaatcatgcagatttttgtgaagacccttacgggcaagactatt
acccttgaggttgagcccagtgattctattgagaatgtaaaagctaagattcaggacaag
gagggtatccctccagaccaacagagattgatctttgctggtaagcagttggaagatggt
cgcacactctctgactacaatatccagaaggaatcaaccctccatttggtactccgtctc
cgtggaggtgccaaaaagcgcaagaagaagaattacacaaccccaaagaagaacaagcac
aagaaaaagaaggtcaagcttgctgtgcttaaatactacaaagttgatgagaacggcaag
atcacccgcctgcgtcgtgaatgcccaaatgaagattgcggagctggcgtctttatggca
tcccacttcgacagacaatactgtggaaaatgttgtcttacatatgtgtttaacaagcct
gatgataaataa
DBGET
integrated database retrieval system
