Ruditapes philippinarum (Manila clam): 132755008
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Entry
132755008 CDS
T09557
Name
(RefSeq) enhancer of mRNA-decapping protein 3-like
KO
K12615
enhancer of mRNA-decapping protein 3
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132755008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rphi03019
]
132755008
Messenger RNA biogenesis [BR:
rphi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
132755008
mRNA degradation factors
5'-3' decay
Decapping complex
132755008
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FDF
LSM14
Motif
Other DBs
NCBI-GeneID:
132755008
NCBI-ProteinID:
XP_060601775
LinkDB
All DBs
Position
Unknown
AA seq
349 aa
AA seq
DB search
MSYVGCLVSLNCGESLGTFQGQVRKVDNSTQSLSISHPFRNGVKCEVPEVTISACDIKEL
KIIKTAHEAKHVLPKKSTPSKLSKETAEDLDSVASPGRIAESKLEQNGNGTAGNSNKVNV
LTNGRDRYVNDRRPTEYSTRNSSPHGNLSGRDRDNGTNGHHSYSGSRYDEGSNGSRNRQT
PTKDEQFRSRRNSESEGRASAKTSVPRKIEFRKKTSSRQDCFSAPVDSLMDEFDFEKNLA
LFDKKAVFEEIENNNPEVIRVGDKKPTKYRHDENVLQSKPTTFQQIKVPKDYGSSYVTDS
GLIVPCIDYDLRNKLFDIAEACGFSMERRLEMIGRSSSEMVLQLLGGSS
NT seq
1049 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgtaggttgtcttgtatccctaaattgtggggagtccttgggtacattccag
ggtcaagtgaggaaggtagacaactcaacacagtctttatctataagtcatccattcaga
aatggggttaaatgtgaagttccagaagtaacaatcagtgcttgcgatataaaggagttg
aaaattataaaaactgctcatgaggcgaagcacgttttacctaaaaaatcaaccccatca
aaactttcaaaagaaacagctgaggatctggactctgtggcatcaccagggagaattgcg
gaatctaaactagagcaaaatggtaacggcactgcaggaaatagtaataaagtaaatgtt
ttgacaaatggaagggacagatatgttaatgacaggaggccaacagagtatagtaccaga
aatagtagtccacatggtaacttgtcaggacgtgacagagataatggtactaatgggcat
cacagttattcagggtcaaggtatgatgaaggtagtaatggttctagaaatagacaaaca
ccaacaaaagatgaacaatttagaagtagaagaaactcagaatcagaaggcagggcgtct
gcgaagacaagtgtcccgagaaagattgagttccgtaagaagacaagttcacggcaagat
tgtttcagtgccccagtagattcattaatggatgagtttgactttgagaaaaatcttgct
ctgtttgataagaaagcagtgtttgaagagattgaaaataataatccggaggtaatacgt
gttggtgataaaaagccgactaaatatagacatgatgagaacgtcctccaatccaaaccc
acaacatttcaacaaataaaagtcccaaaagattatgggagttcttatgttacagattca
ggtttaatagttccatgtatagattatgacctcagaaataagttatttgatatagctgaa
gcttgtgggttttctatggagagaaggttagagatgataggtagatcatctagtgagatg
gtactgcagcttctaggtggcagtagtag
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