Ruditapes philippinarum (Manila clam): 132755105
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Entry
132755105 CDS
T09557
Name
(RefSeq) nuclear pore complex protein Nup107-like
KO
K14301
nuclear pore complex protein Nup107
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132755105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rphi03019
]
132755105
03036 Chromosome and associated proteins [BR:
rphi03036
]
132755105
Messenger RNA biogenesis [BR:
rphi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132755105
Chromosome and associated proteins [BR:
rphi03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
132755105
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
132755105
NCBI-ProteinID:
XP_060601883
LinkDB
All DBs
Position
Unknown
AA seq
957 aa
AA seq
DB search
MDMSRDESFAAQRHGRRSLQTFEAMLDGGSPAVRDQQISKVFKRRSTALNVQKSIQLLDE
SVGSPSTKGWRTPGGTLKHTSYTPRLLSSGTKFDVSTRFGPTPKKTPQGNKSFQRSFHDD
SFQSSFHNTSGLRPLQEEDMTEEITTTNVGLLLEEDPGVSASKGLFEDFLQCHRAHPSEA
ELFLLVEEYQKTCKEQVVMLKKLVTHASRQEEKMRKTFIVLHQLYEEEATWKLIRSLFKD
RHETCMREECMMEEGEEDIQVVQGIYQSDEKIVNALFDRDQSVREAQLVVDWLESCAQDD
CENFADNIKFFSDRAVGYENARHRLQNQQTGVPAGAERNLITELDPDAPIRQNRLLDDLD
KEDEDRLLQYIFVCLRAGQLEKAQKMCSDCGQAWRAATLEGWKLFHDPNFEGVGPEGQRR
AVIGNPHRDIWKTVCWNMSQDARVGIYEKAIYSALSGNLRGVLPVCKSWLDYVWAYFRVF
VDRKVEDEIRLKTTLSRSLAILPGEYWEKNLTTRSVFKEIEANEVMQKESMGLYHLIQKY
VIVGDISGLLDLLYERVRQQGQDVSLHALRFMAHFVLFLRTSEQNTKEELCNSILECYVE
RLIRDKHYNLIAYYVSKLPLNAQVHWYALFLEGITNKDERQHYLDLAEEAGLDLAAVTKK
VVENIRMKSDVDFTSIHEAQESVDTVISEEDRLKIEAIDWLVFDIGQRAEALKQANAVMR
TFIALKKIDAARAVFEKLPPDSVDVVHRTWLQQTGTTMLPLEDKNAVREYLCFKAYLDAM
ESFNDWIQHYHHGQPTQPAPPEGGSFTDRVAYEHRMKQYDQERERWHHNLLMQTQTTKDH
IYNVLLFADGGWMVDQAEEEGEESIADRPDSDPLRHEQMDCLRHLVLPGLVFLLQTVLHT
SEQYQECVRLADILAAEQNKLYQVFRQDELQRVLHLLRESSLKLLDQGRGPLGYERN
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atggatatgtcgagagatgaatcttttgctgcacagcgacatggcaggagaagtttacag
acatttgaggccatgttagatggtggttctccagctgtgagagaccagcaaatcagtaaa
gtatttaaaaggagaagtacagcactcaatgtacagaaatcaatacagttattagatgag
agcgtaggatccccatccacaaagggatggagaactccgggtggaacactaaaacacact
tcatacaccccacgcttgttgtcatcaggaacaaagtttgatgtttcaacaagatttgga
ccaactccaaaaaagacgcctcagggaaacaaatcatttcaaagatcttttcatgatgac
agttttcaatcatcattccacaacacatctgggctgagaccattacaggaggaggacatg
actgaggagataacaacaacaaatgttggcctacttttagaagaggatcctggagtctca
gcatccaaaggtttgtttgaggatttcctacagtgccatagagctcatccgtcggaagca
gaactatttcttctggtggaggaatatcagaagacgtgtaaagaacaagttgttatgttg
aaaaaacttgtcacacatgcctcaagacaagaggaaaagatgagaaagacatttatagta
ttacaccagctgtatgaggaggaggcgacatggaagctgatcaggagtttgttcaaggac
agacatgagacttgtatgagggaagagtgtatgatggaagagggggaggaggacatacaa
gttgtacagggtatatatcagagtgatgaaaagatagtgaatgccttgtttgatagagac
cagtctgtaagagaagctcagttagttgtggactggctggagagttgtgcccaggatgat
tgtgagaattttgcagataatatcaagtttttctctgacagagctgtaggatatgagaat
gcccgccataggttacagaatcaacagactggggtaccagctggtgcagagagaaatctt
attacagaactcgaccctgatgcaccaataagacaaaacaggcttctagatgacctagac
aaagaagatgaagatcgcttattgcagtatatttttgtgtgtttacgagcagggcaactt
gaaaaggcacagaaaatgtgctctgactgtggtcaggcatggagggcagctactttagag
ggatggaaattatttcatgatccaaactttgagggtgttggaccagaaggtcagagacga
gctgtaattggtaatccacaccgagacatttggaagactgtgtgctggaatatgtcacaa
gatgcaagagttggtatttatgagaaggcaatttattcagcattaagtggtaacctacga
ggtgtattgccagtatgtaagtcctggctggactatgtgtgggcatatttccgtgtgttt
gttgaccggaaagtggaggatgaaatcagattgaagacaacattgagccgatctctagcc
attctaccaggagagtactgggagaaaaatctgacaacaagatctgtgttcaaggagata
gaagccaatgaagtgatgcagaaagaatcaatgggtctttatcatctgatacagaaatat
gttattgttggagacatttctggattattggatttactgtatgaacgtgtgaggcaacaa
ggacaagatgtctcgttacatgctctcagatttatggctcattttgttctctttctcaga
acctccgagcaaaatacaaaggaggagttgtgtaattcaatattagagtgttatgttgaa
cgactgatcagagacaaacattataatctcattgcttactatgtatcaaagttaccactc
aatgctcaagtccattggtatgctctcttcttagaaggtataactaacaaggatgagcgt
caacattacctggacctcgccgaggaagctggtctagatctagcagctgtcacgaagaaa
gttgtagaaaatattcgtatgaaatcagatgtagactttacatctatacatgaagcccag
gagtctgtagacactgtcatctcagaggaggacagacttaagatagaagctatagattgg
ttagtgtttgatattggccagcgtgctgaagctctcaaacaagccaatgctgtgatgaga
actttcattgcattaaagaagatagatgcagctcgtgcagtgtttgagaaattaccacca
gattctgtagatgttgtacatagaacctggctgcaacagactgggacaactatgttacca
ctagaagacaagaacgctgtgagggaatatctctgttttaaagcttatctggatgccatg
gaaagtttcaatgattggatccagcactaccaccatggacaaccgacacaaccagcacca
ccggagggtggatcattcactgatagggtagcttatgaacacagaatgaaacaatatgat
caagaaagagaacgatggcaccacaatttgctaatgcaaacacagacaaccaaagatcat
atatacaatgtgttactgtttgctgatggtggctggatggtggatcaagctgaggaggaa
ggagaggagagtatagcagacagaccagatagtgacccattacgacatgaacagatggat
tgtctacgtcaccttgtactaccaggtcttgtctttctactacaaactgttctacatact
agtgaacaatatcaggaatgtgttcgtcttgctgacatcttagcagctgagcaaaacaaa
ctgtaccaggtgtttagacaagatgagttacagagagtgctacatcttctacgagagtcc
tccttgaaattgttagatcagggacgtggtcctctaggatatgaacgtaactaa
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