Ruditapes philippinarum (Manila clam): 132755130
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Entry
132755130 CDS
T09557
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rphi03000
]
132755130
04121 Ubiquitin system [BR:
rphi04121
]
132755130
Transcription factors [BR:
rphi03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
132755130
Ubiquitin system [BR:
rphi04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
132755130
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
hAT-like_RNase-H
Motif
Other DBs
NCBI-GeneID:
132755130
NCBI-ProteinID:
XP_060601914
LinkDB
All DBs
Position
Unknown
AA seq
677 aa
AA seq
DB search
MASDSQHAIENLSQENLTKNMEHEDQVLFNYPGKTRSIVWKYFGFTKKGLGPAIKANLNM
NTAICKLCKKSYANKGNTTNLLFHIDHDHKRTASGDENNNIKKAPTQPTIQALIANPGRL
TQKSRTNLDDALLKLIVGKALPISLVKNPHFIEFTKLLDPRYKLPSQQDVVKSLNTKKDQ
MRSTLKLDLGSVSDVAITHDGWTSCATESYSAVTAHFIDDKWNLKSAVLQTKKVEGSHTS
EKIAEGLKEVQTEWKLPTSLTLVTDNAANERKAAELLGWTRFGCYGHRINLVVKHALEVT
ELNKILGKSRRLVTFFHQSTSATDALIEKQKLVFSNTPGLIGHKLITDVPTRWNSTLAML
GRLAEQLPAIMSIIFDTNCLNKTAISTVKTYCLTSEEHSVVQELISVLKPFETATTILCA
ESSPTMHKVLPCMVKIKKKLEDVESNPLTSPVVKKVILKMKEELLKRTQVEDVPLLAALL
NPDTKNLNFLTAEEQVSARQLLMDTALNLKVDNAALPNVKVKQEEAVSAILPDLPVLPDI
DLESDQNVKFECEKEGPSEKKMKLTDMDEWFDDVCFIGESQQPLQNLIELEVHRYFSHNQ
PQSSKQQTLLQWWQANHYFYPQLATLAKKYLAVPASSVPSERVFSLAGIVVDKKRSRLKP
DLVDTLIFMKMNMETYW
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggactcgcagcatgcaatagaaaacttatcgcaagaaaacctaacaaaaaat
atggaacatgaggaccaggtcttgttcaattacccaggaaaaacgcgatccattgtgtgg
aagtattttggattcacgaaaaaggggcttggaccagcaataaaagcgaacttgaacatg
aacacagccatctgtaaactttgcaaaaaatcgtacgctaataaaggaaatacaacaaat
ttgctattccatattgatcacgaccataaaaggactgcttctggggatgaaaataataac
attaaaaaagcacccacccagccaacaattcaggctctgattgccaaccctggtcgtctt
acacagaagagtagaaccaacttagacgatgcattattaaagttaattgtaggaaaagcc
cttccaatcagccttgtgaaaaatccacacttcattgaatttaccaaattactagaccca
aggtacaagttaccgtctcagcaagatgttgtgaagtctttaaacacgaagaaagaccag
atgcgttcaacccttaagcttgaccttggatctgtatcagatgtagccataacacacgac
ggctggacaagctgtgccacagagagctattcagctgtaacagcacactttattgatgat
aagtggaatctaaaatcagccgtgctgcagactaagaaggtggaaggttcacacacttca
gagaaaatagctgaaggtttaaaagaagtacagacggagtggaaactaccaacatcactt
acattagtaactgataatgctgctaacgaaagaaaggctgctgaactccttggatggaca
cgattcgggtgctacggtcaccgtattaacttagtggtcaaacatgctcttgaggtaact
gagttgaacaagattttgggtaaatcaagacgacttgtaacattttttcatcaatcaaca
agcgccactgatgctttaattgaaaaacaaaagttagtgttttcaaacacaccaggtttg
attggacataaactgataactgacgttcctacacgttggaatagtacactggcaatgctt
ggcagattggcagaacaacttcctgctataatgagtattatctttgatacaaattgtcta
aacaaaactgcaataagcactgtaaaaacctactgtctaacatctgaagaacattctgtg
gtgcaggaactcatttctgttttaaaaccctttgaaaccgcaacaacaattttgtgtgca
gaatctagtcctactatgcataaagtgcttccttgtatggtaaaaatcaaaaagaagttg
gaagatgttgagagtaatcccttaacatctcctgttgttaagaaagttattttgaaaatg
aaagaggaactgttaaaaaggactcaggtggaggatgtacccctcctggcagctctatta
aatcctgataccaagaatctcaatttcttgacagcggaggaacaagtgtctgcccgtcag
ttgctaatggacactgcgttaaatttaaaggttgataatgctgcccttccaaatgttaaa
gtaaaacaagaagaggctgttagtgccattttacctgacttaccagtgttacctgacata
gacctagagtctgaccagaatgttaaatttgaatgtgaaaaggagggtcctagtgaaaag
aaaatgaaattaactgatatggatgagtggttcgacgatgtttgcttcataggagagtcg
caacaaccccttcagaacttaatagagttggaggttcatagatatttttcacacaatcaa
ccacagagttcaaagcagcaaacgcttctgcagtggtggcaagctaatcattatttctat
ccacaacttgcaactttagccaaaaagtacttggcagttccagcatcatcagtaccaagt
gagagggtgttcagcttagctggtattgttgttgacaaaaaacgatctagattaaagcca
gatttggttgatacgttaatttttatgaagatgaacatggaaacatactggtga
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