Ruditapes philippinarum (Manila clam): 132755234
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Entry
132755234 CDS
T09557
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rphi03000
]
132755234
04121 Ubiquitin system [BR:
rphi04121
]
132755234
Transcription factors [BR:
rphi03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
132755234
Ubiquitin system [BR:
rphi04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
132755234
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-BED
zf-C2H2_12
DUF659
DBD_Tnp_Hermes
Motif
Other DBs
NCBI-GeneID:
132755234
NCBI-ProteinID:
XP_060602038
LinkDB
All DBs
Position
Unknown
AA seq
358 aa
AA seq
DB search
MDEFTTVKNPKGKSDIWRHFGLQKSKITQKLIDNTAVCMKCDMVIKCSGGGTSNLSAHIR
RHHPSLLSSAKSLKSSSKTTTADVHVDQKQSETVSLPTIPKLFASKYASSSDRSKLITNK
IARFLVKDLRPYSMVESPEFKDLISCLDPRYTVPGRKVFSERIIPEMYESAKENVKLNLK
NAEQVSLTTDGWTSCATESYMTVTSSHITDSWELKNFVLQTRALPESHTAVHVTAVLNAA
VEEWALPTGHGKPTLVTDNASNMVKAGELFGSLHLGCYAHTLNIAVQKCLSVKRASHLLA
KIRRIVAFFHRSNIANNILQVKAEALGLPQHKLIIDVSTRWNSAYDMVSRFLEMQVAV
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggacgaattcaccacggtcaaaaatccaaaggggaaatcggatatttggaggcatttt
gggctccaaaagtctaaaataacacagaaattaattgataatacagccgtatgtatgaag
tgtgatatggtcataaaatgttcaggaggtgggacgtccaatttatcagctcacattcgc
cgacatcatccgtcattattgtcgtctgctaaatcattaaaatcaagttcaaaaactacc
accgctgatgttcatgtggaccagaaacaaagtgagactgtttctttacctacaatacca
aagctatttgcgtcaaagtatgccagtagttcagatcgatctaaactaataacaaataaa
attgcaagatttttggtgaaagatctccgtccatacagtatggtagaaagtcccgagttt
aaagacttgatcagttgccttgacccaagatatactgtcccaggcaggaaagtgttttca
gaaagaatcatacccgagatgtatgaatctgccaaggaaaatgtgaaacttaatctgaag
aatgcagaacaggtttcactgacgactgatggatggacgtcctgtgctactgaatcatat
atgacagttacatcaagccatatcactgatagttgggagttgaagaactttgtgttgcag
accagggcactcccagagagtcatacagcagtgcatgttacagcagtattaaatgcagca
gttgaggaatgggctctaccaacagggcatggtaagccgactctagtaaccgataatgca
agtaacatggtgaaagctggagagttgtttggttcacttcaccttggatgttatgctcac
acattgaacatagctgtgcagaaatgcttatcagtaaagagagctagtcacctgcttgcc
aagatccgtcgaatagtggctttttttcacagaagcaacattgcaaataatatccttcaa
gtaaaggctgaggctctaggtcttccgcagcataaattgatcattgatgttagcacaagg
tggaacagtgcatatgatatggtgtctagatttctcgagatgcaggtggctgtgtga
DBGET
integrated database retrieval system
