Ruditapes philippinarum (Manila clam): 132755331
Help
Entry
132755331 CDS
T09557
Name
(RefSeq) patched domain-containing protein 3-like isoform X1
KO
K24682
patched domain-containing protein
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rphi04990
]
132755331
Domain-containing proteins not elsewhere classified [BR:
rphi04990
]
Other domain-containing proteins
Patched domain-containing proteins
132755331
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
MMPL
Motif
Other DBs
NCBI-GeneID:
132755331
NCBI-ProteinID:
XP_060602174
LinkDB
All DBs
Position
Unknown
AA seq
864 aa
AA seq
DB search
MKFAQIYEYVEDKIGGVFSSYGRFVARHAWKILIISVIVNAGLGVGMINLTSDIDTGNVY
YPIGSQARKDKDRVEELFPDLSGSHFNSLQLTEEAKWARIIVMSKSGNLLKRAELEEVKT
IAEHVLNITALYNGANIKFSDFCANVNNNCAVEGDLFWSPEFLAAVDKINVTYPIFTSPK
LGAVSYASYIADKVTLDTTGRHLTGVKFIKISFMIRTDGSTYEDMATEWVKNFNSYMEKY
SSNKLDIAYGHFKSRDEELDKNVSGDITLFSITFTLMITYACVSTISGRFTDQVGQRMWL
GFAGIFAAGFAIVAGFGLCAAVGVEFVSIVGVLPFLIIGIGIDDMFILLSGLSEAQSKIS
VEERMAETLRIAGVGISITSLTDVIAFAAGIGSTFISVRNFCIYTSVAVVFCYLNNLTFF
ASCIAINERRINDNRHFMTCRKIDTKEELRRRGASAKTILCCGGSQPTGRHEAEGFIDRF
PRWIIPKIVLKTPFKIIIILLFLGYLAAGIYGCIYLKQGLLLTNLVNEDSYFYKYSQWNE
EYFPRQSPVSFVIQGSYKYSHDNTQALVNKLISDAQSNKYFDGAFEINWLKSFKNSHFYS
NVTEQSFIVGVYDFLQNPMYSRFLNDVVFDSQNQSITASRVYVLTAKLEDSQDEGKMMLE
SRDIADSAAINCFSFSPYFVAFEQYVAILGQSLQSVGIALAAVFVITCIFMPHPVLILFV
TVAVTMIMVGVFGYLFFIDVTLSAITMIHLIMSVGFSIDFTAHICHGYMISTATERGERV
KSAIDKTGAPIFHGAISSLLGIVVLFWAKSYIFRTFGIVMAFVLLFGITHALLLLPVILS
WIGPLRHTVAENEKSMSNLRDKRS
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttgcccaaatttacgagtatgtggaagacaaaataggaggtgtgttttcaagt
tacggccgttttgttgcccgtcatgcctggaaaatccttataatttccgtgatagtaaat
gctggccttggtgtcggaatgatcaatcttacatctgacatcgacacaggcaacgtttat
tatcctataggcagccaagctagaaaagacaaagacagggtagaggaattgtttccagat
ctaagtggatcacatttcaattctctacaactaactgaggaggcaaaatgggcacgaatc
attgtgatgtcaaagtctggaaatctgttaaagagggcagagctagaagaggtcaaaact
atcgctgaacatgttctcaatataacagcgttatataatggcgccaatataaagttttca
gatttttgtgctaatgttaacaataactgtgccgttgagggtgacttgttttggagtcct
gaatttcttgctgctgttgacaagataaacgtcacatacccaatttttaccagtcccaaa
ctgggtgcagtcagttatgcatcttatatagcagataaagtaactctagatactaccgga
aggcaccttactggggtgaagttcatcaaaataagttttatgattcgaactgatgggtca
acttatgaagacatggcaactgaatgggtaaaaaatttcaattcctatatggaaaagtac
tcatcaaacaaactagacattgcatatggtcatttcaagtcacgtgatgaggaactggat
aaaaatgtttctggagatataacattattctccatcacattcactttgatgattacgtat
gcatgtgtgtctacaatatcgggaagattcacagaccaggttggacaaagaatgtggcta
ggttttgcaggcatatttgcagcagggtttgctatcgttgctggttttggactgtgtgca
gctgtaggagttgaatttgtcagcatagttggagttttaccattccttataattggtatt
ggaatagatgacatgttcatacttctctctggactgtcagaggctcagagtaaaatttca
gtggaagaaagaatggctgaaacattacgtattgctggagtcggaatctcaattacatca
ctgactgatgtcatagcattcgcggctggtattggttctacatttatttctgtcagaaac
ttctgtatctatacaagtgtagctgttgtcttttgttatctcaacaatctaacattcttt
gcatcttgtattgcaataaatgaacgcaggatcaacgataatcggcattttatgacttgt
cgaaagatagatacaaaagaagaactacgacgtcgtggggcgtcagcgaagactatccta
tgctgtggtggttctcaaccgacaggaaggcatgaagctgagggattcattgatagattt
ccacgctggataattccaaaaattgtcttaaaaacaccatttaagattataatcatttta
ctattccttgggtatcttgcagctggtatttatggatgcatttatttgaagcaagggtta
ctgttaacaaatttggttaatgaagattcttatttctataaatactcacaatggaatgaa
gaatattttcctcgccagtcacctgtatcgtttgttattcaaggatcgtataaatattca
cacgacaatacacaagctctagttaataaactgataagtgatgcacaatcaaacaaatat
tttgacggtgcgtttgaaattaactggctcaagtcttttaaaaactcacacttttactct
aatgtaactgaacagagttttattgtcggtgtgtatgactttttacagaatcctatgtat
tcccgatttttgaatgatgtcgtgtttgattctcaaaatcaaagtataactgcttcacgt
gtttacgttcttacagctaaacttgaagatagccaggatgaaggcaagatgatgcttgag
tcacgtgacatcgcagattctgctgctataaactgtttttcattttcaccgtattttgta
gcatttgaacagtatgttgctattttaggacagagtttacagtctgtaggaatagccttg
gctgctgtttttgtaattacctgcatatttatgcctcatcccgtccttattttgtttgtt
acagttgctgttactatgattatggtaggtgttttcggatatctattcttcattgatgtt
acccttagtgctataacaatgatacacttgataatgtctgtagggttctccatagatttc
acagctcatatatgtcatggttatatgatttctacggctacggaacgcggggaaagagtg
aaaagtgctattgataaaaccggtgctcctatatttcacggggcaatatcttctctgcta
ggaatcgtcgtattgttttgggcaaaatcgtatatatttcgaacttttggaattgtaatg
gcgtttgttttgctcttcggaataacgcatgcgcttttactacttcctgttattttgtcg
tggattggtcctttaagacatacagtagcagagaatgaaaaaagtatgtcaaatctgcga
gacaaaagatcataa
DBGET
integrated database retrieval system
