Ruditapes philippinarum (Manila clam): 132755592
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Entry
132755592 CDS
T09557
Name
(RefSeq) LOW QUALITY PROTEIN: ornithine decarboxylase-like
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi00330
Arginine and proline metabolism
rphi00480
Glutathione metabolism
rphi01100
Metabolic pathways
rphi04148
Efferocytosis
Module
rphi_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
132755592
09106 Metabolism of other amino acids
00480 Glutathione metabolism
132755592
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
132755592
Enzymes [BR:
rphi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
132755592
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-GeneID:
132755592
NCBI-ProteinID:
XP_060602460
LinkDB
All DBs
Position
Unknown
AA seq
436 aa
AA seq
DB search
MQASIGGEIVTLHTNSSSTADLVNEQVHISRKEESERHFCLCNLGDIIHKYQQMTTLIPR
VKPFYAVKCNEELPVLKVLADLGASFDCASKHEIEKVLNIGVTPARVIYAQPCKQPSMLK
FAKQKGVDKMTFDNVEELYKVKKIFPTARLVLRIMIDSEYKGNQDFSSKYGCHPLDVPTV
LETAKELNLNVVGVSFHVGSNCYDSRAFSAAIQQSRQVFDTGAGLGFNMTLLDIGGGFPG
QLDTGSTFQQIADVVNSSLDTHFPYKEGLEVIAEPGRYMVASAFTIGVNIIAKRIVPHRP
NKQDKGTGINRNDPTVKSIMYYVNDGVYGSFLGKLADYRKYEAKSLKTEVAAVMYESSIW
GPSCDSVDCIVDSTLLPAHDVGEWLYFPDMGAYTLSSHTNFNGMEEPKLIYYCQTDIWNQ
LYSEKSCQYNGPNNTT
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgcaagccagtattggaggcgagatcgtgacattacatacaaacagttcaagcactgct
gaccttgtaaacgagcaagttcacatttccaggaaggaggagagcgagagacatttttgt
ttatgtaatcttggagatataattcacaagtatcaacaaatgacgacactaataccgaga
gttaaacctttttatgctgtaaagtgcaatgaagaattaccagtactaaaggtcctcgct
gatctgggggcatcatttgactgtgctagtaagcacgagatagaaaaggttctcaatatt
ggcgtaacaccagcacgtgtcatatacgcacagccatgcaagcaaccttcaatgctgaag
ttcgcgaaacagaaaggtgtggacaagatgacgtttgacaacgtggaggaactgtataaa
gttaagaagatatttccaacagctagattagttttgagaataatgatagacagtgagtat
aaggggaaccaagatttcagcagtaagtacgggtgtcatccattggacgttcccacagtt
ctcgagaccgcaaaagaactaaaccttaacgtcgtcggtgtaagttttcacgttggtagc
aactgttatgactctagggcattttcagcagccatacagcaatcaaggcaggtatttgat
accggggctggtcttggcttcaatatgacactgcttgacataggaggtggtttcccaggt
caacttgatactggtagcacatttcagcagatagctgatgttgtaaactccagcttagat
acacactttccatataaggaaggtttggaggttatagccgagccgggacgctacatggtc
gcatccgcttttactattggcgtcaacatcatagcaaaacgtattgtgccgcatagacca
aacaaacaagataaagggactggcataaacagaaatgatccgactgtaaagtctataatg
tactatgtgaatgacggagtttacgggtcattcctgggtaaacttgcagattacagaaaa
tatgaggcaaaatctttaaagactgaggtagctgctgtcatgtatgaaagtagtatctgg
ggaccttcatgtgacagtgttgactgtattgtagactctacattattaccagcacatgat
gttggagaatggctgtatttccccgacatgggcgcatacaccttgtcatcacacacaaac
ttcaatggaatggaagagcctaaactaatctattactgtcaaacagacatttggaatcag
ttatacagtgagaagtcttgccagtataatggaccaaataatacaacataa
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