Ruditapes philippinarum (Manila clam): 132755595
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Entry
132755595 CDS
T09557
Name
(RefSeq) ornithine decarboxylase 1-like
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi00330
Arginine and proline metabolism
rphi00480
Glutathione metabolism
rphi01100
Metabolic pathways
rphi04148
Efferocytosis
Module
rphi_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
132755595
09106 Metabolism of other amino acids
00480 Glutathione metabolism
132755595
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
132755595
Enzymes [BR:
rphi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
132755595
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-GeneID:
132755595
NCBI-ProteinID:
XP_060602465
LinkDB
All DBs
Position
Unknown
AA seq
436 aa
AA seq
DB search
MQASIEGEIVTLHTHSSSTADLVNEQVNIARKEESEKHFCLCNLGDIIHKYQRWTTLLPR
VKPFYAVKCNEELPVLKVLADLGASFDCACKHEIEKVLNIGVTPARVIYAQPCKQPSMLK
FAEQKGVDKMTFDNVEELYKVKKIFPTARLVLRIMIDSEYKGNQDFSSKYGCHPLDVPTV
LETAKELNLNVVGVSFHVGSNCYDSRAFSAAIQQSRQVFDTGAGLGFNMTLLDIGGGFPG
QLDTGTKFQQIADVVNSSLDTHFPCNEGLEIIAEPGRYMVASAFTIGVNIIAKRIVSHRP
NKQDKGTGINRNDPTVKSIMYYVNDGVYGSFLSKLSVDRKYEAKSLKTDQDAALYESSVW
GPSCDSVDCIVDSTLLPAHDVGEWLYFPDMGAYTLSSHTKFNGMEEPKLIYYCQTDTWNR
LYSEKSYQYNGPNNTT
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgcaagccagtattgaaggtgagattgtgacattacatacacacagttcaagcactgct
gaccttgtaaacgagcaagttaacattgccaggaaggaggagagcgagaaacatttctgt
ttatgtaatcttggagatataattcacaagtaccaacgatggacgacacttttaccgaga
gttaaacctttttatgctgtaaagtgcaatgaagaattaccagtactgaaggtcctcgct
gatctgggggcatcatttgactgtgcttgtaagcacgagatagaaaaggttctcaatatt
ggcgtaacaccagcacgtgtcatatacgcacagccatgcaagcaaccttcaatgctgaag
ttcgcggaacagaaaggtgtggacaaaatgacgtttgacaacgtggaggaactgtataaa
gttaagaagatatttccaacagccagattagttttaaggataatgatagacagtgagtat
aaggggaatcaagatttcagcagtaagtacgggtgtcatccattggacgttcccactgtt
ctcgagactgcgaaagaactaaaccttaacgtcgttggtgttagttttcacgttggtagc
aactgttatgactctagggcattttcagcagccatacagcaatcaaggcaggtatttgat
accggggctggtcttggcttcaatatgacactgcttgacataggaggtggtttcccaggt
caacttgatactggtacaaaatttcaacagatagctgatgttgtaaactccagcttagat
acacactttccttgcaatgaaggtttggagattatagccgagccgggacgctacatggtc
gcatccgcttttactattggcgtcaacatcatagcaaaacgtattgtgtcacacagacca
aacaaacaagataaagggactggcataaacagaaatgacccgactgtaaagtctataatg
tactatgtgaatgatggagtttatgggtcattcctaagtaaactttcagtggacagaaaa
tatgaggcgaaatctttaaagacagaccaagatgctgccttgtatgagagtagtgtatgg
ggaccttcatgtgacagtgttgactgtattgtagactctacattattaccagcacatgat
gttggagagtggctgtatttccccgacatgggggcttacacattgtcatcacacacaaaa
ttcaatggaatggaagagcctaagctaatctattactgtcaaaccgacacttggaatcgg
ttatacagtgagaagtcttaccagtataatggaccaaataatacaacataa
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