Ruditapes philippinarum (Manila clam): 132756034
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Entry
132756034 CDS
T09557
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rphi03019
]
132756034
Messenger RNA biogenesis [BR:
rphi03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
132756034
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
KH_N4BP1_1st
zf-CCCH_2
zf-CCCH
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
132756034
NCBI-ProteinID:
XP_060602981
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MENDTFSIDTANISVIYKQKEKIERLFDVQLVIFGNEKSNGNEVTGFCNCSVLSQSANAQ
KNADKAKRYIQALTASGPDFTIITVNYDVSVIDRILHFKEDLEKECCAVVTASQGMNSIS
IKGHREDVGKAKNFTDHLAMEEPQSNEYEPDKNQNSDNFHNKSTNSTFGAEENESSDDCS
DENDDFIKRNPPDYQSKLEFAFKLGYGEADLICALKNLDEDAGQNELLSELIKNSSSRQE
DKGTFGSDFDGSDNVKGDLVDIQEDQRKFFSGSDSSPFRHVIMDGSNVAMSHGNKETFSC
MGIQLAVDWFKERGHTNITVFVPQWRKETSRSDARIKDQQILNELEKEKILVFTPSRRIG
GKRVVCYDDRYILKLAVDTDGIVVSNDNYRDLIGENNQFKKVVEERLLMYSFVNDRFMPP
DDPLGRNGPTLDNFLLKEPAEPEPLPPPCPYGSKKCTYGNKCKYYHPERRTQPHKSVTEK
LAEQAKQRMLAMRRENSVPADRKKKLTRTKTPLQRTQSGNPDELYRSESVQDTSERSKDN
KVDEYNQKLSEGLMRMELDRALCDPDSMRGSSPKRDDRHDFSPRSKLGDQPERSSPRMME
LRQKGRSSSKGENLPV
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgatacatttagcattgatacagccaacatatcagtcatttataagcaaaaa
gaaaaaatagaacgactgtttgacgtacaacttgttatctttggaaatgagaaatcaaat
ggaaatgaggtcaccggattttgtaattgttcagttttgtcgcaatcagcaaatgcacag
aaaaatgcggataaagcaaagaggtatattcaagctctgacagcaagtggaccagatttc
accatcataacagtaaactatgatgtcagtgttatagatagaattctccattttaaagaa
gaccttgagaaagaatgctgtgctgttgtaacagcaagtcagggaatgaacagtataagt
ataaagggacacagagaagatgtcggaaaggcaaaaaactttacagatcatcttgctatg
gaggaacctcaatcaaatgaatatgaacctgataaaaaccaaaattctgataatttccat
aataaatcaaccaattccactttcggtgctgaagaaaacgaatcatcagatgattgctct
gatgaaaatgatgattttataaaaaggaatcctcctgattaccagagtaaactggaattt
gcctttaaacttggatatggggaggcagatttgatatgtgctcttaaaaatttagacgaa
gatgcaggacaaaatgaactgttatctgaattaatcaaaaatagttcctcaaggcaagaa
gacaagggaacctttggatctgattttgatgggtctgacaatgttaaaggggacttggtt
gacattcaggaagaccaaagaaagtttttttctggtagtgattctagtccattcaggcat
gttattatggatgggagtaatgtggcaatgagccatggaaataaagaaacgttttcatgt
atgggaatacagctggcagtagactggtttaaggaaagaggtcacacaaatatcacagta
tttgtaccacaatggcgcaaagaaacatctagatctgatgcccgaatcaaagatcagcag
atactgaatgagttggagaaagagaagattctggtattcactccatcgaggcgtattggt
gggaaacgtgttgtgtgttatgatgacaggtacattctcaagctagctgttgatacggac
ggtattgttgtttccaatgacaactacagagatttgattggggagaataatcagttcaag
aaagtagttgaagagagactgcttatgtactctttcgtcaatgatagattcatgccccct
gacgaccctctaggcagaaatggacccacacttgacaactttttattgaaagaacctgcc
gagcctgaacccttgccaccaccttgcccatatggtagtaaaaaatgtacatatggtaac
aagtgcaagtattaccatcctgaaagaagaacccaaccacataaatctgtcactgagaaa
ttagcggagcaggcaaaacaacgcatgctggcaatgcgtcgagaaaactctgtacctgca
gacagaaagaaaaaattgacccgcaccaaaaccccacttcaacgtacacaatcaggaaat
cctgacgagttgtataggtcagaatcagtgcaggacacatctgagagaagcaaagataat
aaggttgatgaatacaaccagaaactatctgagggcttaatgagaatggaattagacaga
gctctatgtgatcctgattctatgaggggaagttctccaaaaagagatgataggcatgat
ttttcaccaagatctaaactgggtgatcaacctgaaaggtcaagtcctagaatgatggaa
ctgagacagaagggaagaagttcatcaaaaggggaaaatctccccgtttaa
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