Ruditapes philippinarum (Manila clam): 132756070
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Entry
132756070 CDS
T09557
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132756070
Membrane trafficking [BR:
rphi04131
]
Protein recycling
Others
Retriever complex
132756070
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TCAD7
Motif
Other DBs
NCBI-GeneID:
132756070
NCBI-ProteinID:
XP_060603037
LinkDB
All DBs
Position
Unknown
AA seq
948 aa
AA seq
DB search
MAASWHPRKRNYERETETERLPATVASSHPLKAITKTTYIFYLNCHRSQEWKQSNCLVLP
DTRVYFLVIQESGTKGRADSLDDSFEPWSAKRVDILSKYTTSEKLSITTSFLSSADKEHV
VIKSQSQTTTGTMSDKVKNRLEQLDDFEEGSVQEMLNLSQQEYVSRIEDLNQALIAAWDQ
DQRVKALKIAIQCSKLLADVSVIQFYPSKFVLITDILDTFGKLVYVRLRDKAQYFPPGSG
VAIKLPENFTPDQVPDSAKETCRNWFFKIASIRELIPRFYVEAAIMKCYSFLNPGEYADA
LRRLSQMISGMGDPLVSLYAKCFLSRVGIAVAPSIRDHLLPMFDGFLATFPQVQGDSVQN
ILAIQKLEMPRYLTLFSPGLDWLLQCIAHKASDNTLTDILEKSRKQCNSALLLNSLISAF
KPEYIAARATKFIEMIKECEETGFPKHLLFRTLGTCLAIADPPGDQKLTVLNEVWKPITK
LKNPADYMGCAESWMEFIVKHFGKREINTVLNDIIKHLTPDRAFEDFYPQLQSVVSKILV
HIHDFSLLFSLEKFLPFIDMFQKESVKVDVCKNITEAFAKFQESETKDPVIINAMMFVCK
TMHDSVNALTLDDEKKSISNLISEFVRKISFGRDFEQQLSFYVEARASFTNLDIVLIQLI
QNVNNLAIQTRNVVNGNHSRKTGNFVRACAAYCFITIPSLQSVFSQLQLYLLSGQVALLN
QCYSQGDAFFKAAVSLIPDVPRVMEAEGKHKSSEPFLVDYISNFVSTLLVVPDNPDSSVL
YLLRGLLNILQNYTWEPNSDAKVVVYTRVLAMLSASCQETYPYHVDKVDSNDSLYASDPK
YIKEVCGICSTLVEEILAHLKTLTTPETQKRQTMLSMELFNTVVNHSDIGQKNLQDLVVN
LWNLAHRNNQMDVKQTRIVYASIKMKSSGLDGKAYQELLSKLPLDNTT
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggccgcctcgtggcaccccagaaagagaaattatgagcgtgagacagagactgaaaga
ctgccagcaacggttgcatcttcacatcctctgaaagccattacaaaaactacctacata
ttctaccttaactgtcataggtctcaagagtggaaacaaagtaattgtttagtcttgcct
gatactagagtttattttctggttatacaggaaagtggtacaaaaggtcgagcagattct
ctggatgattcatttgagccatggtcagcaaagcgagtagatatactgtccaaatacact
acatcagaaaagctgtcaataaccacaagttttttgtcttctgcagacaaggaacatgtt
gttataaaatcacagagtcaaaccactactggtacaatgtcagacaaagtgaaaaacaga
ctggaacaattagatgactttgaagagggttctgtacaagagatgttgaatctaagtcag
caggagtatgtttcccgtatagaagatctcaatcaggctcttatagcagcttgggatcaa
gaccagagagtaaaggcgcttaaaatagctatacagtgctctaagttgttggctgatgta
agtgtgatacagttctaccccagcaagtttgttcttataacagatatacttgatacattt
gggaagttggtgtatgtgagattgagagataaagcccagtattttccccctggaagtgga
gtagccattaaactacctgaaaattttactcctgatcaggtgcctgattcggctaaggaa
acctgtcgtaattggttctttaagattgcctcaatccgtgaactaattccaaggttttat
gtggaggcggctatcatgaaatgctacagtttccttaatccaggagagtatgctgatgca
ttaagacgcctgtctcagatgataagtggaatgggtgatccacttgtatcgctatatgct
aaatgtttcctcagtagggtgggaatagcagttgctccaagcatcagggatcacctgtta
ccaatgtttgatgggtttctagccacattcccacaggtacaaggtgacagtgtacagaat
attttggccatacagaaattagagatgccacgctacctgaccctgttctcacctggcttg
gactggttgctacaatgtatagctcataaagcatctgataacactctcactgatatacta
gagaagtcgaggaaacaatgtaacagtgctttgttactgaactctctgatatcagcattt
aaaccagagtatatagcagctagagccaccaagtttattgagatgatcaaagaatgtgaa
gaaacaggctttcctaaacatttattattccgtacattgggaacatgtctggcaatagct
gatccaccaggggaccagaaactgacagtgttaaatgaagtctggaaaccaataactaaa
ctgaaaaatccagctgattacatggggtgtgcagagtcctggatggagtttattgttaaa
cattttgggaaacgggagataaacacagtattaaatgacattatcaagcatttgacccca
gatagggcatttgaagatttttacccccagttacaatctgtggtttctaagatactggtt
cacatccatgacttctccctgcttttctcactggaaaagttcttgccatttattgacatg
ttccaaaaggaaagtgtaaaggttgatgtctgcaaaaatatcaccgaagcatttgcaaaa
tttcaagagtcagaaacgaaagatccagttattataaatgctatgatgtttgtttgtaaa
actatgcatgattctgtcaatgcattaacactggatgatgagaagaaatcaattagcaac
cttatatcagagtttgtgaggaagatttcatttggccgtgactttgagcaacaacttagc
ttctatgttgaagccagggcctcttttaccaacctagacatcgttcttatacagttgatt
cagaatgttaacaacttagccatccagacaagaaatgttgtcaatggaaatcattcaaga
aaaactggcaactttgttagggcatgtgcagcatattgttttataacaataccttcacta
cagtctgtgttttcccagctacaactttacctgttgtctggtcaggtagctcttctaaac
cagtgttatagtcaaggtgatgcattttttaaggcagcagtttcacttatacctgatgtc
ccacgtgtaatggaggcggaaggaaaacacaaatcgtcggaacctttccttgtggattat
atcagtaactttgtctctactctcctagttgtaccagacaatccagactccagtgtgttg
tatttactcagaggtctattgaacatactccaaaattacacctgggaaccaaactcggat
gctaaagttgtagtatataccagagtactggcaatgttgtcagcatcgtgccaggaaaca
tacccatatcatgttgacaaagtggattccaatgacagtttatatgcctcagatcccaaa
tatataaaagaggtgtgtggtatatgttcaactcttgttgaagaaatcctcgcccaccta
aaaactctaacaacacctgagactcagaaaaggcagaccatgttgtctatggaattgttc
aacacagttgtaaatcattctgatattgggcaaaaaaatcttcaagatttagtggtcaac
ttatggaacttggcgcacagaaacaatcaaatggatgtaaaacaaacgagaatagtgtat
gcatcaataaagatgaagtcatctggacttgatgggaaggcttatcaggaacttttatct
aaactaccactggacaataccacgtag
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