Ruditapes philippinarum (Manila clam): 132756194
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Entry
132756194 CDS
T09557
Name
(RefSeq) LOW QUALITY PROTEIN: sterol regulatory element-binding protein 1-like
KO
K07197
sterol regulatory element-binding transcription factor 1
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rphi03000
]
132756194
04131 Membrane trafficking [BR:
rphi04131
]
132756194
Transcription factors [BR:
rphi03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
132756194
Membrane trafficking [BR:
rphi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
132756194
Autophagy
Mitophagy
Other mitophagy associated proteins
132756194
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_IRO3
Motif
Other DBs
NCBI-GeneID:
132756194
NCBI-ProteinID:
XP_060603188
LinkDB
All DBs
Position
Unknown
AA seq
1157 aa
AA seq
DB search
MADPLGWSLGADGFPDLGADFLSPNSFDNSNIDDIDDIVRYICPDGPGAADVFESAPETS
TADLLLQDAQLHNTGIIDIKDEPSDFELGEQLLLSHVHQSVKPEPNPFSLTSESLLNSLQ
NTNTQQALELNPTLSSAQQLQQAALKLQAAATQRQNQQKQIQLLQLLQQYQQQQQQQQQQ
QQQQQQQQQQQQQQQQKITLTTDQLKLLLLEYQNRQNAPVVQPTPPPQQQQQNSNSSLTV
QQLQQLLQLQNQLKSNSGNQLQVSNIGSPVQVSSPISIQNAPSPSSIQISSSPTYIQTPS
PIQIQTSQGTSSSPIQIHSQQVTKTSAVRPIQNIVTSGSTIVTTNIPIQMVDRSNEKVPI
NRLNQIKNEGKPVKGEKRTSHNAIEKRYRLSINDKITELKDLVAGTEAKLNKSAILRKAI
DYIRYLLSQNERLKRENLQLKMAAKKQNLQELLLLSKDTTEDLGMMTPPSSDMSSDSDSS
PGSPVYDEMDSQSSFSNSGMADKTRFTLCVFMLGVLAFNPFGAIFDASGVQGSASYQTDF
GGRQLQGMEEVDVGSWSMWRSGLIPTLLLWLLNGVIVAVVLARLFIFGEPVTYKNSEAST
AYWRHRNQAEQDSARGDYSASANQWRQALRTLGRPLPTSKLDLAASLIWQIFRQVFHKIY
IGRWLFCRARGIRRKSVEPTDVKNSARDAAIAYFKLHQLHLAGLIPGSSIWGLNLGLCAV
NLAEAAGESVTGATMAEIYISTALRVTTGKFKFMARYFLSCARYTMSRSIEQIPACVQWL
CHPEGHRFFVDQDWKLGCKSSIFTTCPSEADPLSQVTQQFREHLLERSLYSLVTPGNRSL
DGGSQSSEIILYTQLLTEASCLRKKEGVTNLSTALEIPEMDESSAWWAAVVSVAVYWLIG
DDENAERSFPMVDSFPKKLQHSDDPLPKSVLLAFRARRNFSXNNQGSNLYSVIRQCDRAG
RLLRESLKLSYARENTDITQAVQLLVCDWLLATRTEIWEKEQSTGERDNASQTELIAFQQ
DLTSLRKLAHDNKSALPRVFLHEATGRMMAGANPARTQQLLDRSIIRRRVSREEKGLIIQ
KESDGETPDREQATALLMAGRHLPESLMASPGDRATLISEASRLYEVLGDKKSVQSCRRT
LMLLEEKSHVQSATIQC
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atggccgatccactaggttggtctctcggagctgatggttttcctgacttaggagccgat
tttctgagtccaaattcgtttgacaacagcaacattgatgatattgatgatattgtaagg
tatatatgcccagatggcccgggtgctgcagatgtgtttgaaagtgcaccagaaacaagt
acagcagatttgttactgcaagatgctcagttacacaacactggaataattgacattaaa
gatgaaccatctgacttcgaattaggtgaacaattgttgctatctcatgtacatcagtca
gtcaagccagaaccaaacccattctccttgacatcagaatctcttcttaactcattacag
aatacaaatactcagcaagctttagaacttaacccaacattaagcagtgctcaacagttg
caacaggctgctcttaaattacaagctgcagcaacacaaagacaaaaccaacaaaaacaa
attcaactgcttcagttattgcagcaatatcagcagcagcagcaacaacagcagcagcaa
caacaacagcagcaacaacaacaacagcagcagcagcaacaacaacagaaaataacactg
acaacagatcagttaaagttgttgcttttggagtatcaaaatagacagaatgctcctgtt
gttcaacccacaccgccaccacagcagcagcaacagaatagcaacagtagtcttacagtg
cagcaacttcaacagttactacaactacagaatcagttgaaatctaacagtggaaatcag
cttcaagtatcaaacataggatcccctgtgcaggtatccagtccgatctctatccagaat
gctccatcaccatcatccatacaaataagttcatcgcctacttacatccagacaccatca
ccaatccaaatacaaactagtcaaggcacctcatcctcccccattcagatacattcacag
caggttacgaaaacgtcagcagtacgacccattcagaatattgtgaccagtggcagtact
attgtaacaacaaatattccaattcagatggtagataggtcaaatgaaaaggtgcctata
aatagattgaatcagataaagaatgaggggaaacctgtaaagggagagaagagaacttca
cacaatgctatagaaaagcgttacagattaagcatcaatgacaagattacagaattgaaa
gatttggtcgcaggaacagaagctaagttaaacaagtctgcaatattaaggaaagctata
gattacatccgttatctcctcagccaaaatgagagattgaaaagagaaaatttacagctg
aaaatggcagcaaagaaacaaaatttacaggagttgttgttgttgtcaaaggacactaca
gaggacttgggtatgatgactccgcccagttccgacatgagcagtgatagtgattcttca
cctggaagtcctgtctatgatgaaatggactcccagtccagtttttcaaatagtggtatg
gcagacaagacaagatttactctgtgtgtattcatgttgggtgtcttggcattcaatcca
tttggtgctatatttgatgccagtggtgtacaaggctctgcttcataccagacagacttt
ggtggaagacagttacaagggatggaagaagtggatgtaggttcatggtcaatgtggaga
tctggacttattccaactttgcttctttggttactgaacggtgttattgtagcagttgtg
ttagcaagactgtttatctttggggaaccagtcacttacaagaacagtgaagcttcaact
gcctactggagacataggaaccaggctgaacaagattctgctagaggagactattctgca
tctgccaatcaatggagacaagcattacggacccttggtcgaccattacccacctcaaaa
ttggacttggctgctagtttgatatggcagatattcagacaggtgtttcacaagatctac
attggtcgttggttgttctgtcgtgctagaggtatcagaaggaaatcggttgaaccaaca
gatgtcaaaaactctgccagagacgctgccattgcttacttcaagctccatcaactacac
ttagcaggtctgataccaggaagtagcatttggggattgaatcttggtttgtgtgccgtg
aatctagcagaggcagctggagaatcagttactggggcaactatggcagaaatttacatt
tcaactgctctccgagtaaccacaggaaaattcaagttcatggctagatatttcctgagc
tgtgccagatacacgatgtctcgcagtattgaacagatccctgcttgtgtacagtggctg
tgtcatccagaaggtcatagattttttgtagaccaagattggaaacttggctgcaagagt
agcattttcactacatgcccttctgaagctgacccattgtcacaagtgacccaacagttt
agagagcacttgttggagagatctctgtattctctagttacccctggcaatcgttcgcta
gatggtggatcacagtcatcagagatcatactttatacgcaacttctaacagaggcatca
tgtctcaggaagaaagaaggcgttactaatctgtcaacagctttggaaataccagagatg
gatgagtcctcagcctggtgggcagcagttgtatctgtagcagtttactggttgattggt
gatgatgaaaatgctgaacgtagctttcctatggtagactctttcccgaagaaactacaa
cactctgatgatcctctgccaaagtctgtgttgttggcatttagagccaggaggaacttc
tcgngtaataaccagggatctaacttatactctgtaatcagacagtgtgacagggctggc
cgtcttcttagagagagtctgaaattgtcatacgctagagaaaatacagatattacacag
gctgtacagttgctggtatgtgattggttgctggcaacaaggacagagatttgggagaaa
gaacagagcaccggggagagagataatgcttcacaaacagaactgatagcattccagcaa
gaccttaccagcctcagaaaactggcacatgataataaatctgcattgcccagggtattt
ttacatgaggctacaggtcgcatgatggctggagccaacccagcacgcacccaacaattg
ttggacagaagtattatcagacgtagggtatccagggaagagaaaggtttaattatccag
aaagaatcagatggggagacgccggatagagaacaggctacagccctactgatggctgga
cgccaccttccagagtccctgatggcaagtccaggggatcgtgccacgctcatatcagag
gctagccgtctttatgaagttttgggtgataaaaaatctgtacaaagttgtagacggact
ttgatgctgcttgaggagaagagccatgttcaaagtgcaaccattcagtgttaa
DBGET
integrated database retrieval system
