Ruditapes philippinarum (Manila clam): 132756387
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Entry
132756387 CDS
T09557
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 3-like
KO
K11986
ubiquitin carboxyl-terminal hydrolase 3 [EC:
3.4.19.12
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rphi01002
]
132756387
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rphi04121
]
132756387
Enzymes [BR:
rphi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
132756387
Peptidases and inhibitors [BR:
rphi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
132756387
Ubiquitin system [BR:
rphi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
132756387
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
zf-UBP
Motif
Other DBs
NCBI-GeneID:
132756387
NCBI-ProteinID:
XP_060603431
LinkDB
All DBs
Position
Unknown
AA seq
504 aa
AA seq
DB search
MCRYVSGHALKHHESRTGHCVCMDADSFAVYCYTCDEFVTNDTKSGHVDLLRKNLQTIRS
AQNQLRQKSQRRRSDSSQSESENDRKRQKKDDKLKKIRPKSSGLRNLGNTCFMSAVLQSL
RYAGDITLLIELINYFYKHFSAFVEYIFSLICHTFALMEEFVHFKNTKLIVFVVYPADQG
SGNDEDVLLVEELRKTLIAIWEGGKSAISPESLLHVIWKLVPRFRGYQQQDAHEFMRYLL
DRLHTELLALLPYTATNNNSPFIGPKGKSTIVTAIFGGLLQSEVNCLICGVESKKHDPFL
DLSLDIPVQYHNIKSSKGKENIDQPVCKLAECLTHFTEVEELEETELYMCTGCKKKQRST
KKFWIRRLPNVLCLHLKRFKWVTSFRQKLETYIEFPLTNLDMNKYILDMHETRGTSVGSN
IYDLAAVIVHHGSGAGSGHYTAYVLNEGQWYHFNDSSVTACEQETVMRCKAYILFYIRRE
IRLPDYLNVSNGNGRAGSHSSSRS
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgtgcagatatgtgagtggtcatgcattgaagcatcatgaatcaaggactggacattgt
gtgtgtatggatgctgacagttttgctgtgtactgctacacatgtgatgaattcgtcaca
aatgacaccaaatctggacatgtagacttgttgaggaaaaacttacagaccataagaagc
gcacagaaccagttacgccagaagtcacagagacgacggtcagatagttcacagtctgaa
tcggaaaatgacagaaaacgacaaaagaaagacgataaattaaaaaagataagaccaaaa
tcttctggtcttagaaaccttggcaacacatgtttcatgagtgcagtcttacaatctctt
aggtatgctggagatattaccttgttaattgaattaattaactacttttacaagcatttt
agtgcttttgtagaatatattttttcattaatatgccatacttttgcattgatggaagaa
tttgttcattttaaaaacacgaaactgatagtttttgtagtttaccctgcagatcagggc
agcggcaatgatgaagatgttttgcttgttgaagagttaaggaagacattgatagctata
tgggaaggtgggaagtcagcaatatccccagaatccctgcttcatgttatctggaaactt
gtcccgaggttcagagggtatcagcagcaagatgctcatgagtttatgagatatctgtta
gacagacttcatacagagttactggccctgctgccatatacagctacaaataataatagc
ccatttataggtccgaaaggtaaaagtactattgtaacagccatatttggaggtttatta
cagagtgaagtcaactgtcttatatgtggtgtagagtccaaaaaacatgatcccttccta
gatctttcattagatataccagttcagtatcataacataaaatcctcaaaaggcaaagaa
aatatagaccagcctgtatgtaaattagcagaatgtttaacgcatttcacagaggtagaa
gagctagaggagacagagttgtatatgtgtacagggtgtaaaaagaaacagcgatctact
aaaaaattctggatacgtagacttcctaatgttttatgtttacatttgaagagattcaag
tgggtgacatcatttcgacaaaagttggagacgtatatagagtttccgttaacaaatctt
gatatgaacaagtacattttagacatgcatgaaacaaggggtacaagtgtaggaagtaat
atctatgatttggctgctgtgattgtccaccatggatcaggggcagggtcaggtcactat
acagcatatgtattaaatgaaggtcaatggtaccatttcaatgacagttcagtaacagca
tgcgaacaggagacggtgatgcgatgtaaagcgtacatcttgttctacatccgacgagag
atacgcctgccagattatcttaacgtatccaacggcaacggccgagctggttctcattcc
agttcacgtagttga
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